RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 STAB2Q8WWQ8 2551 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 J3QLW9 94 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 ZNF19P17023 458 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 SSTR5P35346 364 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 LUMP51884 338 aaPredicted RBP18.52■□□□□ 0.56
CPSF1-202ENST00000527827 RAB25P57735 213 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 ALKBH1Q13686 389 aaKnown RBP18.52■□□□□ 0.56
CPSF1-202ENST00000527827 TEX38Q6PEX7 206 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 SLC16A12Q6ZSM3 486 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 MRGPRDQ8TDS7 321 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 C4orf36Q96KX1 117 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 BARHL1Q9BZE3 327 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 DCLRE1BQ9H816 532 aa18.52■□□□□ 0.56
CPSF1-202ENST00000527827 TRAV39A0A0B4J263 110 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 A0A1W2PPE3 182 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 RPLP1P05386 114 aaKnown RBP18.51■□□□□ 0.55
CPSF1-202ENST00000527827 GP2P55259 537 aaKnown RBP18.51■□□□□ 0.55
CPSF1-202ENST00000527827 PAX5Q02548 391 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 DEFB136Q30KP8 78 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 ZNF691Q5VV52 312 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 LCNL1Q6ZST4 164 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 EAF1Q96JC9 268 aaPredicted RBP18.51■□□□□ 0.55
CPSF1-202ENST00000527827 PRR25Q96S07 402 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 OAZ3Q9UMX2 235 aa18.51■□□□□ 0.55
CPSF1-202ENST00000527827 AP4M1O00189 453 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 HSD17B6O14756 317 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 SULT1B1O43704 296 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 GPR12P47775 334 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 ZNF816Q0VGE8 651 aaPredicted RBP18.5■□□□□ 0.55
CPSF1-202ENST00000527827 ZSCAN26Q16670 478 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 PARP16Q8N5Y8 322 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 Q8N6K4 173 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 PXT1Q8NFP0 134 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 OR10A7Q8NGE5 316 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 OR5D14Q8NGL3 314 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 OR10X1Q8NGY0 326 aa18.5■□□□□ 0.55
CPSF1-202ENST00000527827 TRUB1Q8WWH5 349 aaKnown RBP18.5■□□□□ 0.55
CPSF1-202ENST00000527827 IGHV1-3A0A0C4DH29 117 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 IL13RA2Q14627 380 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 PNLIPRP3Q17RR3 467 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 SLC25A30Q5SVS4 291 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 LPCAT4Q643R3 524 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 MOB3BQ86TA1 216 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 TGIF2LXQ8IUE1 241 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 SERPINA12Q8IW75 414 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 ACBD7Q8N6N7 88 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 Q8N9W7 124 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 ABCG5Q9H222 651 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 IMPAD1Q9NX62 359 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 ZNF581Q9P0T4 197 aa18.49■□□□□ 0.55
CPSF1-202ENST00000527827 EXOGQ9Y2C4 368 aaKnown RBP18.49■□□□□ 0.55
CPSF1-202ENST00000527827 IGHV3-72A0A0B4J1Y9 119 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 NCBP2LA6PVI3 153 aaKnown RBP18.48■□□□□ 0.55
CPSF1-202ENST00000527827 FCGR1AP12314 374 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 REG1BP48304 166 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 KIR2DS1Q14954 304 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 PIGYQ3MUY2 71 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 IZUMO1Q8IYV9 350 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 RNF152Q8N8N0 203 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 Q8NFD4 153 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 OR10K1Q8NGX5 313 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 OR8U1Q8NH10 309 aa18.48■□□□□ 0.55
CPSF1-202ENST00000527827 LIN7CQ9NUP9 197 aaKnown RBP18.48■□□□□ 0.55
CPSF1-202ENST00000527827 CCRL2O00421 344 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 GABRPO00591 440 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 ZFPL1O95159 310 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 GAPDHP04406 335 aaKnown RBP18.47■□□□□ 0.55
CPSF1-202ENST00000527827 CDX1P47902 265 aaPredicted RBP18.47■□□□□ 0.55
CPSF1-202ENST00000527827 KCNJ3P48549 501 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 SNRPGP62308 76 aaKnown RBP18.47■□□□□ 0.55
CPSF1-202ENST00000527827 GPR50Q13585 617 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 C9orf66Q5T8R8 295 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 OR5M8Q8NGP6 311 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 CENPNQ96H22 339 aaPredicted RBP18.47■□□□□ 0.55
CPSF1-202ENST00000527827 ISG20L2Q9H9L3 353 aaKnown RBP18.47■□□□□ 0.55
CPSF1-202ENST00000527827 SCOCQ9UIL1 159 aa18.47■□□□□ 0.55
CPSF1-202ENST00000527827 SAC3D1A6NKF1 404 aa18.46■□□□□ 0.55
CPSF1-202ENST00000527827 FOXE3Q13461 319 aa18.46■□□□□ 0.55
CPSF1-202ENST00000527827 CXorf66Q5JRM2 361 aaPredicted RBP18.46■□□□□ 0.55
CPSF1-202ENST00000527827 LHFPL3Q86UP9 236 aa18.46■□□□□ 0.55
CPSF1-202ENST00000527827 TNFAIP8L1Q8WVP5 186 aa18.46■□□□□ 0.55
CPSF1-202ENST00000527827 LGALS12Q96DT0 336 aa18.46■□□□□ 0.55
CPSF1-202ENST00000527827 ASCL2Q99929 193 aa18.46■□□□□ 0.55
CPSF1-202ENST00000527827 PLSCR3Q9NRY6 295 aa18.46■□□□□ 0.55
CPSF1-202ENST00000527827 E9PI62 339 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 ECI1P42126 302 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 GALEQ14376 348 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 MEDAGQ5VYS4 303 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 ZNF529Q6P280 563 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 ASCL4Q6XD76 172 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 SYS1Q8N2H4 156 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 SUMF2Q8NBJ7 301 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 TMEM104Q8NE00 496 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 OR51A2Q8NGJ7 313 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 OR2T10Q8NGZ9 312 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 PDCD1LG2Q9BQ51 273 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 ALG8Q9BVK2 526 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 DPCDQ9BVM2 203 aaPredicted RBP18.45■□□□□ 0.54
CPSF1-202ENST00000527827 GON7Q9BXV9 100 aa18.45■□□□□ 0.54
CPSF1-202ENST00000527827 AASSQ9UDR5 926 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms