RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 OR51B6Q9H340 312 aa13.08□□□□□ -0.32
USH1C-207ENST00000527720 UQCC1Q9NVA1 299 aa13.08□□□□□ -0.32
USH1C-207ENST00000527720 RCL1Q9Y2P8 373 aaKnown RBP13.08□□□□□ -0.32
USH1C-207ENST00000527720 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 IGKV1D-13A0A0B4J2D9 117 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 NPIPB11E5RHQ5 1161 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 F8W036 122 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 DEGS1O15121 323 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 FBXO24O75426 580 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 WNT2P09544 360 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 IGKV1-13P0DP09 117 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 RAC2P15153 192 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 ADCYAP1P18509 176 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
USH1C-207ENST00000527720 GUSBP1Q15486 140 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 FAM214BQ7L5A3 538 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 BOD1Q96IK1 185 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 C11orf1Q9H5F2 150 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 ZDHHC8Q9ULC8 765 aa13.07□□□□□ -0.32
USH1C-207ENST00000527720 NKX2-6A6NCS4 301 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 H0Y980 276 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 HS3ST1O14792 307 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 FTH1P19P0C7X4 201 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 SELEP16581 610 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
USH1C-207ENST00000527720 AKR1C2P52895 323 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 PMP22Q01453 160 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 AKR1C1Q04828 323 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 GABRA6Q16445 453 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 SWI5Q1ZZU3 235 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 SMUG1Q53HV7 270 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 Q6P435 159 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 Q6ZT83 130 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 OR5D13Q8NGL4 314 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 OR10J5Q8NHC4 309 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 RDH5Q92781 318 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 KIRREL1Q96J84 757 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 OR2W1Q9Y3N9 320 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 SIGLEC5O15389 551 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 NKX2-8O15522 239 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 VDAC1P21796 283 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 NKX2-1P43699 371 aaPredicted RBP13.06□□□□□ -0.32
USH1C-207ENST00000527720 SRSF3P84103 164 aaKnown RBP13.06□□□□□ -0.32
USH1C-207ENST00000527720 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 C20orf204Q6ZNR8 217 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 H1FOOQ8IZA3 346 aaPredicted RBP13.06□□□□□ -0.32
USH1C-207ENST00000527720 ASCL3Q9NQ33 180 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 CCL28Q9NRJ3 127 aa13.06□□□□□ -0.32
USH1C-207ENST00000527720 IQCF6A8MYZ5 107 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 AQP7O14520 342 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 RHBDL1O75783 438 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 SPP1P10451 314 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 MMP9P14780 707 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 ZNF44P15621 663 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 RAB5CP51148 216 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 CCL11P51671 97 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 ERVK11-1P61568 191 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 ZNF324BQ6AW86 544 aaPredicted RBP13.05□□□□□ -0.32
USH1C-207ENST00000527720 Q6ZRG5 221 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 C17orf78Q8N4C9 275 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 FDCSPQ8NFU4 85 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 TRAV17A0A0B4J275 112 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 TMEM210A6NLX4 147 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 SNAPINO95295 136 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 CELA3BP08861 270 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 IDH3GP51553 393 aaPredicted RBP13.05□□□□□ -0.32
USH1C-207ENST00000527720 ARHGDIBP52566 201 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 VASH2Q86V25 355 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 MYPOPQ86VE0 399 aaPredicted RBP13.05□□□□□ -0.32
USH1C-207ENST00000527720 PUSL1Q8N0Z8 303 aaKnown RBP13.05□□□□□ -0.32
USH1C-207ENST00000527720 OR2C3Q8N628 320 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 SCCPDHQ8NBX0 429 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 C1orf162Q8NEQ5 155 aaPredicted RBP13.05□□□□□ -0.32
USH1C-207ENST00000527720 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 LILRB1Q8NHL6 650 aaPredicted RBP13.05□□□□□ -0.32
USH1C-207ENST00000527720 NRIP2Q9BQI9 281 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 OR2J1Q9GZK6 312 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 WFDC1Q9HC57 220 aa13.05□□□□□ -0.32
USH1C-207ENST00000527720 HSD17B6O14756 317 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 PGLYRP1O75594 196 aaPredicted RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 CD5P06127 495 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 DANCRP0C864 163 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 NOVA1P51513 510 aaKnown RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 IGF2-ASQ6U949 168 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 C5orf24Q7Z6I8 188 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 WDR86Q86TI4 376 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 BSCL2Q96G97 398 aaPredicted RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 TRIB1Q96RU8 372 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 ADAT1Q9BUB4 502 aaKnown RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 TRIM77I1YAP6 450 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 NUPL2O15504 423 aaKnown RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 PGA5P0DJD9 388 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 MUC1P15941 1255 aaPredicted RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 F2RP25116 425 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 UCP2P55851 309 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms