RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZNF506Q5JVG8 444 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SPANXN4Q5MJ08 99 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ZNF678Q5SXM1 525 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ARMC4Q5T2S8 1044 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 MRPL2Q5T653 305 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 C9orf135Q5VTT2 229 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ZNF691Q5VV52 312 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 LIPKQ5VXJ0 399 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 FAM219BQ5XKK7 198 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 PVRIGQ6DKI7 326 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CGB2Q6NT52 195 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C8orf74Q6P047 294 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TTC27Q6P3X3 843 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CCDC137Q6PK04 289 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 HEPN1Q6WQI6 88 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 WDR88Q6ZMY6 472 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SLC35D2Q76EJ3 337 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C5orf24Q7Z6I8 188 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 RPP25LQ8N5L8 163 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 MINDY2Q8NBR6 621 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 OR9Q1Q8NGQ5 310 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 OR13C5Q8NGS8 318 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ANGPTL6Q8NI99 470 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 HDAC2Q92769 488 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 CORO2AQ92828 525 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 MCHR2Q969V1 340 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ROPN1LQ96C74 230 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 FLYWCH2Q96CP2 140 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 MS4A14Q96JA4 679 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 C18orf15Q96N68 181 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 GPX7Q96SL4 187 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 ATP6V0BQ99437 205 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 NAPGQ99747 312 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 KLHDC3Q9BQ90 382 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SULT4A1Q9BR01 284 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 DPY30Q9C005 99 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 NDEL1Q9GZM8 345 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ABCG5Q9H222 651 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 OR51B6Q9H340 312 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TXNIPQ9H3M7 391 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 FN3KQ9H479 309 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 IKZF5Q9H5V7 419 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 RNF167Q9H6Y7 350 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 YY1AP1Q9H869 796 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 CACYBPQ9HB71 228 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 POLE4Q9NR33 117 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 GSN-AS1Q9NRJ2 163 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 FARSBQ9NSD9 589 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 HAO2Q9NYQ3 351 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TAS2R3Q9NYW6 316 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 TECRQ9NZ01 308 aaKnown RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 DPM3Q9P2X0 92 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 BTNL2Q9UIR0 455 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 SIGLEC9Q9Y336 463 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 NDUFAF1Q9Y375 327 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 AMMECR1Q9Y4X0 333 aaPredicted RBP1.06□□□□□ -2.24
CD44-212ENST00000524922 UGT2A1Q9Y4X1 527 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 MPC1Q9Y5U8 109 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 LINC00312Q9Y6C7 94 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 WSB1Q9Y6I7 421 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 V9GYQ6 96 aa1.06□□□□□ -2.24
CD44-212ENST00000524922 ARHGAP32A7KAX9 2087 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 IGHV2-26A0A0B4J1V2 119 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 A0A0G2JLM5 398 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 RNF103-CHMP3A0A140T963 221 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 A0A1W2PRG6 482 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 hADV38S2A0JD32 116 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 FUOMA2VDF0 154 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 TRAPPC13A5PLN9 417 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 GGT3PA6NGU5 568 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 OR5B21A6NL26 309 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 CD300LBA8K4G0 201 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 A8MT66 165 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 C9JVG2 144 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 LOC110117498-PIK3R3F6TDL0 507 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 LINC01619G3V211 115 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 LY6LH3BQJ8 138 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 PANO1I0J062 215 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 PGRMC1O00264 195 aaKnown RBP1.05□□□□□ -2.24
CD44-212ENST00000524922 TGOLN2O43493 480 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 XRCC2O43543 280 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 SGCEO43556 437 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 MPZL2O60487 215 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 DEDDO75618 318 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 FCN3O75636 299 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 OR4F21O95013 312 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 KRT75O95678 551 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 TXNDC12O95881 172 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 CYB5R3P00387 301 aaPredicted RBP1.05□□□□□ -2.24
CD44-212ENST00000524922 CST4P01036 141 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 HLA-DRB1P01911 266 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 IFNA4P05014 189 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 ZNF728P0DKX0 622 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 NQO1P15559 274 aaKnown RBP1.05□□□□□ -2.24
CD44-212ENST00000524922 SPNP16150 400 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 NCF2P19878 526 aaPredicted RBP1.05□□□□□ -2.24
CD44-212ENST00000524922 PTMSP20962 102 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 PPIBP23284 216 aaKnown RBP1.05□□□□□ -2.24
CD44-212ENST00000524922 ACKR3P25106 362 aa1.05□□□□□ -2.24
CD44-212ENST00000524922 CRABP1P29762 137 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms