RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SUMO1P63165 101 aaKnown RBP12.09□□□□□ -0.47
SYNPO-205ENST00000522122 GUCA2BQ16661 112 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 MPV17LQ2QL34 196 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 VAX1Q5SQQ9 334 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 HES4Q9HCC6 221 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF98A6NK75 572 aa12.08□□□□□ -0.47
SYNPO-205ENST00000522122 TSPAN2O60636 221 aa12.08□□□□□ -0.47
SYNPO-205ENST00000522122 LINC00518Q8N0U6 118 aa12.08□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF385AQ96PM9 386 aaKnown RBP12.08□□□□□ -0.47
SYNPO-205ENST00000522122 LRFN3Q9BTN0 628 aa12.08□□□□□ -0.47
SYNPO-205ENST00000522122 PNPP00491 289 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 OPN1MWP04001 364 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 OPN1MW2P0DN77 364 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 OPN1MW3P0DN78 364 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 FCARP24071 287 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 EWSR1Q01844 656 aaKnown RBP eCLIP12.08□□□□□ -0.48
SYNPO-205ENST00000522122 PIGYQ3MUY2 71 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 STUMQ69YW2 141 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.48
SYNPO-205ENST00000522122 EIF4E3Q8N5X7 224 aaKnown RBP12.08□□□□□ -0.48
SYNPO-205ENST00000522122 ZNF519Q8TB69 540 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 IGHV3-43A0A0B4J1X8 118 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 SOX15O60248 233 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 CRYBA1P05813 215 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 FBP1P09467 338 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 IGHV3-43DP0DP04 118 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 FAM3AP98173 230 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 PLPPR5Q32ZL2 321 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 FAM219AQ8IW50 185 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 LRRC29Q8WV35 223 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.48
SYNPO-205ENST00000522122 TMEM74BQ9NUR3 256 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 IGHMP01871 453 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 IQCJQ1A5X6 159 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 BSXQ3C1V8 233 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 TUSC5Q8IXB3 177 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 SLC22A18ASQ8N1D0 253 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 KLHDC1Q8N7A1 406 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 SMRP1Q8NCR6 262 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 NUDT16L1Q9BRJ7 211 aaKnown RBP12.08□□□□□ -0.48
SYNPO-205ENST00000522122 RSRP1Q9BUV0 290 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 GPR35Q9HC97 309 aa12.08□□□□□ -0.48
SYNPO-205ENST00000522122 COL4A4P53420 1690 aaPredicted RBP12.08□□□□□ -0.48
SYNPO-205ENST00000522122 NKX2-6A6NCS4 301 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 LIFP15018 202 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 HLA-GP17693 338 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 CHRNA7P36544 502 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 ZNF83P51522 516 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.07□□□□□ -0.48
SYNPO-205ENST00000522122 SLC16A13Q7RTY0 426 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 GLRX5Q86SX6 157 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 GFI1Q99684 422 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 CASP8AP2Q9UKL3 1982 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 IGHV5-10-1A0A0J9YXX1 117 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 RAB7AP51149 207 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 ZNF154Q13106 437 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 LRRC75AQ8NAA5 344 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 ZNF501Q96CX3 271 aaPredicted RBP12.07□□□□□ -0.48
SYNPO-205ENST00000522122 FZR1Q9UM11 496 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 C2orf68Q2NKX9 166 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 ABHD3Q8WU67 409 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 LPAR5Q9H1C0 372 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 FSCN3Q9NQT6 498 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 DBX1A6NMT0 343 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 BCL3P20749 454 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 SULT1A1P50225 295 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
SYNPO-205ENST00000522122 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
SYNPO-205ENST00000522122 SLC45A2Q9UMX9 530 aa12.07□□□□□ -0.48
SYNPO-205ENST00000522122 XKRY2A2RUG3 117 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 NPIPB9F8W1W9 429 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 SIGLEC5O15389 551 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 NDUFB3O43676 98 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 SPINK2P20155 84 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 FOXL2P58012 376 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 RHOBP62745 196 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 SIGLEC14Q08ET2 396 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 CT55Q8WUE5 264 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 NRIP2Q9BQI9 281 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 CRYABP02511 175 aaKnown RBP12.06□□□□□ -0.48
SYNPO-205ENST00000522122 FAM27BQ5VT28 67 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 OR5A2Q8NGI9 324 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 GNB4Q9HAV0 340 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 SLC7A10Q9NS82 523 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 IL11P20809 199 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 LRRC10Q5BKY1 277 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 SPINK9Q5DT21 86 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 TEX30Q5JUR7 227 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 LDLRAD3Q86YD5 345 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 WDR54Q9H977 334 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 GVINP1Q7Z2Y8 2422 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 A0A0U1RQV5 110 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 A0A1W2PP11 408 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 CRYM-AS1A6NIL9 109 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 RPL11P62913 178 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms