RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 NRGNQ92686 78 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 REEP6Q96HR9 211 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 CCL19Q99731 98 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 SLC30A2Q9BRI3 323 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 CACNG6Q9BXT2 260 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 TTTY10Q9BZA0 68 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 MRPL37Q9BZE1 423 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 SLC22A4Q9H015 551 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 RAB1BQ9H0U4 201 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 LIME1Q9H400 295 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 MOB1AQ9H8S9 216 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 GPR84Q9NQS5 396 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ACOXLQ9NUZ1 547 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 TMEM100Q9NV29 134 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 PAK1IP1Q9NWT1 392 aaPredicted RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 TAAR3PQ9P1P4 343 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 MYEF2Q9P2K5 600 aaKnown RBP2.58□□□□□ -2
VPS13B-209ENST00000521559 ZNF391Q9UJN7 358 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 BLOC1S6Q9UL45 172 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 FZR1Q9UM11 496 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 SLC22A13Q9Y226 551 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 ERGIC3Q9Y282 383 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 PLEKHA6Q9Y2H5 1048 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 DNAJC13O75165 2243 aa2.58□□□□□ -2
VPS13B-209ENST00000521559 GTF3C1Q12789 2109 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZGRF1Q86YA3 2104 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 NBASA2RRP1 2371 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 IGHV3OR16-10A0A075B7F0 116 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 TRBV2A0A0J9YWF9 115 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZSCAN5BA6NJL1 495 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 TMEM212A6NML5 194 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 DHRS7CA6NNS2 312 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ANKRD30BLA7E2S9 258 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MPTX1A8MV57 137 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 PRSS46E5RG02 174 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 H7C417 338 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MYL12BO14950 172 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 CTDSPLO15194 276 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 SYT7O43581 403 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 DHRS3O75911 302 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 CST4P01036 141 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 IGHV1-46P01743 117 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MT-ND2P03891 347 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ERCC1P07992 297 aaPredicted RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 CD55P08174 381 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 UBCP0CG48 685 aaKnown RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 CCL1P22362 96 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ACKR3P25106 362 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MAP2K4P45985 399 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 PPOXP50336 477 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 GTF2A1P52655 376 aaPredicted RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 EFNA4P52798 201 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 SNU13P55769 128 aaKnown RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 ATP5J2P56134 94 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 WNT4P56705 351 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 TAS2R43P59537 309 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 GABARAPL2P60520 117 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MRPS11P82912 194 aaKnown RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 TNFAIP6P98066 277 aaPredicted RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 BDH1Q02338 343 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 EMX1Q04741 257 aaPredicted RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 SLC3A1Q07837 685 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 RIPPLY1Q0D2K3 151 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MLLT11Q13015 90 aaPredicted RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 GPR50Q13585 617 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 TPBGQ13641 420 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 CDK5R1Q15078 307 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 OR8B8Q15620 311 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZNF674Q2M3X9 581 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 DEFB113Q30KQ7 82 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 KCTD21Q4G0X4 260 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 XAF1Q6GPH4 301 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZNF343Q6P1L6 599 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZNF773Q6PK81 442 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 BTNL8Q6UX41 500 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 Q6ZR03 302 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 Q6ZRP5 223 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 IL17RELQ6ZVW7 336 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 RDH10Q8IZV5 341 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 OR5AS1Q8N127 324 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 LRRC75A-AS1Q8N1F1 130 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ZCCHC24Q8N2G6 241 aaKnown RBP2.57□□□□□ -2
VPS13B-209ENST00000521559 ZNF676Q8N7Q3 588 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 SPERTQ8NA61 448 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 OR8G5Q8NG78 346 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 OR56B2PQ8NGI1 322 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 OR5AK2Q8NH90 309 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 OR2AE1Q8NHA4 323 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 GATAD1Q8WUU5 269 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 GHSRQ92847 366 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 C10orf35Q96D05 121 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 OR5M11Q96RB7 305 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MGLLQ99685 303 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 MND1Q9BWT6 205 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 CCDC90BQ9GZT6 254 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 COMMD4Q9H0A8 199 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 SHARPINQ9H0F6 387 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 CXXC4Q9H2H0 198 aa2.57□□□□□ -2
VPS13B-209ENST00000521559 ABCB9Q9NP78 766 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms