RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 OR6C3Q9NZP0 311 aa14.7□□□□□ -0.06
SDC2-205ENST00000520233 LINC00312Q9Y6C7 94 aa14.7□□□□□ -0.06
SDC2-205ENST00000520233 TRGV10A0A0A0MS01 117 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 PPIAL4CA0A0B4J2A2 164 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 IGHV2-70DA0A0C4DH43 119 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 FABP12A6NFH5 140 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 SMAD7O15105 426 aaKnown RBP14.69□□□□□ -0.06
SDC2-205ENST00000520233 ENSAO43768 121 aaKnown RBP14.69□□□□□ -0.06
SDC2-205ENST00000520233 PPIAL4GP0DN37 164 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 MADCAM1Q13477 382 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 CR1LQ2VPA4 569 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 TMEM200BQ69YZ2 307 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 FAM185AQ8N0U4 392 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 OR4K15Q8NH41 348 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 DACT3Q96B18 629 aaPredicted RBP14.69□□□□□ -0.06
SDC2-205ENST00000520233 COX4I2Q96KJ9 171 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 HDHD3Q9BSH5 251 aaPredicted RBP14.69□□□□□ -0.06
SDC2-205ENST00000520233 LPAR2Q9HBW0 351 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 CHMP1AQ9HD42 196 aaPredicted RBP14.69□□□□□ -0.06
SDC2-205ENST00000520233 TRAPPC2LQ9UL33 140 aa14.69□□□□□ -0.06
SDC2-205ENST00000520233 A0A0G2JMP0 313 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 A0A0X1KG70 313 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 KIR2DS1A0A191URI9 304 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 A0A1W2PPH5 198 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 A0A1W2PQ09 198 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 SSX5O60225 188 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 LIPFP07098 398 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 PTHLHP12272 177 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 DTYMKP23919 212 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 PRSS3P35030 304 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 ETV6P41212 452 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 IL18Q14116 193 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 SPANXN2Q5MJ10 180 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 PYHIN1Q6K0P9 492 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 ZNF880Q6PDB4 577 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 FAM131AQ6UXB0 335 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 TCF23Q7RTU1 214 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 SNX29P2Q8IUI4 249 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 ZNF565Q8N9K5 539 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 OR4M2Q8NGB6 313 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 OR13A1Q8NGR1 328 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 NUDCD2Q8WVJ2 157 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 MSI2Q96DH6 328 aaKnown RBP14.68□□□□□ -0.06
SDC2-205ENST00000520233 ABHD1Q96SE0 405 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 MBNL3Q9NUK0 354 aaKnown RBP14.68□□□□□ -0.06
SDC2-205ENST00000520233 TAS2R3Q9NYW6 316 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 UBE2J1Q9Y385 318 aaPredicted RBP14.68□□□□□ -0.06
SDC2-205ENST00000520233 V9GYH0 126 aa14.68□□□□□ -0.06
SDC2-205ENST00000520233 NOTCH2Q04721 2471 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 TRAV20A0A0B4J274 112 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 FCGR3AP08637 254 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 CGB3P0DN86 165 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 CGB7P0DN87 165 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 PTBP1P26599 531 aaKnown RBP eCLIP14.67□□□□□ -0.064e-12■□□□□ 11.3
SDC2-205ENST00000520233 ZNF273Q14593 569 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 CYB5R2Q6BCY4 276 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 MOB1BQ7L9L4 216 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 TRAPPC6BQ86SZ2 158 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 CCDC107Q8WV48 283 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 SCPEP1Q9HB40 452 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 MMP26Q9NRE1 261 aa14.67□□□□□ -0.06
SDC2-205ENST00000520233 TRAV39A0A0B4J263 110 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 SULT1C2O00338 296 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 CTDSPLO15194 276 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 ORC5O43913 435 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 GZMHP20718 246 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 GLP1RP43220 463 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 CBX5P45973 191 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 DVL1P1P54792 670 aaPredicted RBP14.66□□□□□ -0.06
SDC2-205ENST00000520233 MRPS10P82664 201 aaKnown RBP14.66□□□□□ -0.06
SDC2-205ENST00000520233 GUCA2AQ02747 115 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 SRSF7Q16629 238 aaKnown RBP eCLIP14.66□□□□□ -0.06
SDC2-205ENST00000520233 C6orf183Q5T699 404 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 TRAT1Q6PIZ9 186 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 BTNL3Q6UXE8 466 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 Q6ZPA2 131 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 ZNF554Q86TJ5 538 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 GLCCI1Q86VQ1 547 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 MRGPRDQ8TDS7 321 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 GCDHQ92947 438 aaPredicted RBP14.66□□□□□ -0.06
SDC2-205ENST00000520233 TMEM186Q96B77 213 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 C18orf12Q96KH6 178 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 ZNF714Q96N38 554 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 OCSTAMPQ9BR26 566 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 Q9N2K0 584 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 OPN4Q9UHM6 478 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 MGAT4AQ9UM21 535 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 INSIG2Q9Y5U4 225 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 CR1P17927 2039 aa14.66□□□□□ -0.06
SDC2-205ENST00000520233 MAST4O15021 2626 aa14.65□□□□□ -0.06
SDC2-205ENST00000520233 MEX3AA1L020 520 aaKnown RBP14.65□□□□□ -0.06
SDC2-205ENST00000520233 MEIOCA2RUB1 952 aa14.65□□□□□ -0.06
SDC2-205ENST00000520233 ZNF729A6NN14 1252 aaPredicted RBP14.65□□□□□ -0.06
SDC2-205ENST00000520233 TGFAP01135 160 aa14.65□□□□□ -0.06
SDC2-205ENST00000520233 LPLP06858 475 aa14.65□□□□□ -0.06
SDC2-205ENST00000520233 ZNF728P0DKX0 622 aa14.65□□□□□ -0.06
SDC2-205ENST00000520233 RCC1P18754 421 aaPredicted RBP14.65□□□□□ -0.06
SDC2-205ENST00000520233 GATA3P23771 443 aa14.65□□□□□ -0.06
SDC2-205ENST00000520233 DLX6P56179 175 aa14.65□□□□□ -0.06
SDC2-205ENST00000520233 KIR3DL3Q8N743 410 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms