RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 C18orf12Q96KH6 178 aa7.84□□□□□ -1.15
CLN8-203ENST00000518780 CMSS1Q9BQ75 279 aaKnown RBP7.84□□□□□ -1.15
CLN8-203ENST00000518780 SULT4A1Q9BR01 284 aa7.84□□□□□ -1.15
CLN8-203ENST00000518780 MIXL1Q9H2W2 232 aa7.84□□□□□ -1.15
CLN8-203ENST00000518780 GAL3ST2Q9H3Q3 398 aa7.84□□□□□ -1.15
CLN8-203ENST00000518780 LINC00574Q9H8X3 128 aa7.84□□□□□ -1.15
CLN8-203ENST00000518780 MBNL3Q9NUK0 354 aaKnown RBP7.84□□□□□ -1.15
CLN8-203ENST00000518780 EXTL2Q9UBQ6 330 aa7.84□□□□□ -1.15
CLN8-203ENST00000518780 KCNK7Q9Y2U2 307 aa7.84□□□□□ -1.15
CLN8-203ENST00000518780 CHD3Q12873 2000 aaKnown RBP7.84□□□□□ -1.15
CLN8-203ENST00000518780 MYO9AB2RTY4 2548 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 MEIKINA0A087WXM9 373 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 IGHV2-70DA0A0C4DH43 119 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 A0A0G2JMP0 313 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 A0A0X1KG70 313 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 A0A1B0GW55 424 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 A0A1W2PQ09 198 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 FABP12A6NFH5 140 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 ZNF729A6NN14 1252 aaPredicted RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 FAM157AC9JC47 383 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 J3QLI3 93 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 M0R1W7 72 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 HSPB6O14558 160 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 CTDSPLO15194 276 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 PHF1O43189 567 aaPredicted RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 DIRAS3O95661 229 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 HLA-DQB1P01920 261 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 TFF1P04155 84 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4L2P0CJ85 424 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4L3P0CJ86 424 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4L4P0CJ87 422 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4L5P0CJ88 424 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4L6P0CJ89 424 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4L7P0CJ90 424 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 SELLP14151 372 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 GNB3P16520 340 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 ZFP36P26651 326 aaKnown RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 IL2RGP31785 369 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 PRSS3P35030 304 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 KIR2DS4P43632 304 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 GLIPR1P48060 266 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 TAS2R20P59543 309 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 GNG2P59768 71 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 SEC61A1P61619 476 aaKnown RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 LCN2P80188 198 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 PAX2Q02962 417 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 ARFRP1Q13795 201 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 EDDM3AQ14507 147 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 KIR2DS1Q14954 304 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 ATXN7L3Q14CW9 347 aaPredicted RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 TMEM200BQ69YZ2 307 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 ZNF880Q6PDB4 577 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 CNIH2Q6PI25 160 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4L9Q6RFH8 374 aaPredicted RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 CCDC190Q86UF4 302 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 GLCCI1Q86VQ1 547 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 LAX1Q8IWV1 398 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 OR4M2Q8NGB6 313 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 OR4M1Q8NGD0 313 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 PLPPR1Q8TBJ4 325 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DACT3Q96B18 629 aaPredicted RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 TMEM186Q96B77 213 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 SOSTQ9BQB4 213 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 UNKLQ9H9P5 680 aaKnown RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 KCNIP1Q9NZI2 227 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 ZNF581Q9P0T4 197 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 DUX4Q9UBX2 424 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 AK3Q9UIJ7 227 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 KIF25Q9UIL4 384 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 TRAPPC2LQ9UL33 140 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 KPTNQ9Y664 436 aa7.83□□□□□ -1.16
CLN8-203ENST00000518780 MAP1AP78559 2803 aaPredicted RBP7.83□□□□□ -1.16
CLN8-203ENST00000518780 KBTBD11-OT1A0A1B0GTJ5 212 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 C22orf46C9J442 243 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 SPINT2O43291 252 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 FCN3O75636 299 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 TGFAP01135 160 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 ZNF728P0DKX0 622 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 CGB3P0DN86 165 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 CGB7P0DN87 165 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 ZNF45Q02386 682 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 SSBP1Q04837 148 aaKnown RBP7.82□□□□□ -1.16
CLN8-203ENST00000518780 PAX8Q06710 450 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 OR52W1Q6IF63 320 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 FAM185AQ8N0U4 392 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 MRPL30Q8TCC3 161 aaKnown RBP7.82□□□□□ -1.16
CLN8-203ENST00000518780 MSI2Q96DH6 328 aaKnown RBP7.82□□□□□ -1.16
CLN8-203ENST00000518780 ZNF714Q96N38 554 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 TEX15Q9BXT5 2789 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 CHMP1AQ9HD42 196 aaPredicted RBP7.82□□□□□ -1.16
CLN8-203ENST00000518780 C19orf12Q9NSK7 152 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 MRPS7Q9Y2R9 242 aaKnown RBP7.82□□□□□ -1.16
CLN8-203ENST00000518780 INSIG2Q9Y5U4 225 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 CSMD2Q7Z408 3487 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 ITPR3Q14573 2671 aa7.82□□□□□ -1.16
CLN8-203ENST00000518780 MALRD1Q5VYJ5 2156 aa7.81□□□□□ -1.16
CLN8-203ENST00000518780 TMEM235A6NFC5 223 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms