RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF787Q6DD87 383 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR13G1Q8NGZ3 307 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 ZNF519Q8TB69 540 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 M1APQ8TC57 530 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 G6PC2Q9NQR9 355 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 HSBP1L1C9JCN9 74 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 THBS3P49746 956 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 MLF1P58340 268 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 FAM209BQ5JX69 171 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 ZNF439Q8NDP4 499 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR2M3Q8NG83 312 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 CCL17Q92583 94 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 MRPL24Q96A35 216 aaKnown RBP9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 LPAR5Q9H1C0 372 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 SLC35B3Q9H1N7 401 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 C5orf66Q9H5L9 145 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 MTCH1Q9NZJ7 389 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 PSG11Q9UQ72 335 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 ZNF106Q9H2Y7 1883 aaKnown RBP9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 TRGV10A0A0A0MS01 117 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 AP4M1O00189 453 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 CLN5O75503 358 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR5AC1P0C628 307 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 SULT1A2P50226 295 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 UBE2G2P60604 165 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 PECRQ9BY49 303 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 UCK1Q9HA47 277 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 TAAR3PQ9P1P4 343 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 TRAV39A0A0B4J263 110 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 PPP5D1E7EU14 171 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 GEMIN2O14893 280 aaKnown RBP9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 ADAM20O43506 726 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 PDGFBP01127 241 aaPredicted RBP9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 ISG15P05161 165 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 TLE1Q04724 770 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 C4orf17Q53FE4 359 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 ADAMTS17Q8TE56 1095 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 MELTFP08582 738 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 GNG10P50151 68 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 SULT1A1P50225 295 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 PPP1CBP62140 327 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 LSM6P62312 80 aaKnown RBP9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 VAX1Q5SQQ9 334 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR10AD1Q8NGE0 317 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 AQP10Q96PS8 301 aa9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 GAR1Q9NY12 217 aaKnown RBP9.47□□□□□ -0.89
PCDHGA1-202ENST00000517417 CLEC3BP05452 202 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 UNC119Q13432 240 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 DCAF10Q5QP82 559 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 SMIM7Q9BQ49 75 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 TGIF2Q9GZN2 237 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 CREBBPQ92793 2442 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 COL4A6Q14031 1691 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 A0A0J9YW62 118 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 CDIPTO14735 213 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 FCGR3BO75015 233 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 SLC25A6P12236 298 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 COX5AP20674 150 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 SCGB2A2Q13296 93 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 LYG1Q8N1E2 194 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 MRGPRDQ8TDS7 321 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 GNB4Q9HAV0 340 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 TREM2Q9NZC2 230 aa9.46□□□□□ -0.89
PCDHGA1-202ENST00000517417 EYSQ5T1H1 3165 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 UBE2L5PA0A1B0GUS4 154 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 LIFP15018 202 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR3A1P47881 315 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 ERHP84090 104 aaKnown RBP9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 PMS2CLQ68D20 193 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 GPR87Q9BY21 358 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 ACTR3CQ9C0K3 210 aaPredicted RBP9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 TINAGQ9UJW2 476 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 FAM24AA6NFZ4 105 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 TNFRSF1AP19438 455 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 NUBP1P53384 320 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 IGLV3-21P80748 117 aaPredicted RBP9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 DHRS11Q6UWP2 260 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 Q8IYB0 196 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 LRRC29Q8WV35 223 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 ANXA10Q9UJ72 324 aa9.46□□□□□ -0.9
PCDHGA1-202ENST00000517417 H0Y8G0 127 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 IGFBP3P17936 291 aaPredicted RBP9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 P2RY4P51582 365 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 SURF2Q15527 256 aaPredicted RBP9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 HIKESHIQ53FT3 197 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 SPINK9Q5DT21 86 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 STUMQ69YW2 141 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR5C1Q8NGR4 320 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 ACY3Q96HD9 319 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 TMED3Q9Y3Q3 217 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 OPN1MWP04001 364 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 CTSDP07339 412 aaPredicted RBP9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 OPN1MW2P0DN77 364 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 OPN1MW3P0DN78 364 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 HKR1P10072 659 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 TMEM267Q0VDI3 215 aaPredicted RBP9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 Q3ZCU0 254 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms