RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 MROQ9BYG7 248 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC17A9Q9BYT1 436 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC19A3Q9BZV2 496 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR11A1Q9GZK7 315 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHST5Q9GZS9 411 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 EIF5A2Q9GZV4 153 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM107BQ9H098 131 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC25A31Q9H0C2 315 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DEFB127Q9H1M4 99 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ABCG5Q9H222 651 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR51E2Q9H255 320 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DCSTAMPQ9H295 470 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MIXL1Q9H2W2 232 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q9H3A6 140 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SRMSQ9H3Y6 488 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 C11orf49Q9H6J7 331 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 VSIRQ9H7M9 311 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF696Q9H7X3 374 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF430Q9H8G1 570 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF702PQ9H963 129 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 HES4Q9HCC6 221 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ENY2Q9NPA8 101 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLCO1B3Q9NPD5 702 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PARP11Q9NR21 331 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MMP26Q9NRE1 261 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PLSCR3Q9NRY6 295 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 LYRM2Q9NU23 88 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DDIT4Q9NX09 232 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MARCH5Q9NX47 278 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPANXCQ9NY87 97 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF226Q9NYT6 803 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IDI2-AS1Q9NZ38 188 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM216Q9P0N5 145 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OPTCQ9UBM4 332 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CTSZQ9UBR2 303 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MTFP1Q9UDX5 166 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RSL24D1Q9UHA3 163 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PCYOX1Q9UHG3 505 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GLS2Q9UI32 602 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RWDD2AQ9UIY3 292 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DKKL1Q9UK85 242 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 VPREB3Q9UKI3 123 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR52A1Q9UKL2 312 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KLK13Q9UKR3 277 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PYCARDQ9ULZ3 195 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GINS2Q9Y248 185 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SIGLEC7Q9Y286 467 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC35A3Q9Y2D2 325 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRELID3BQ9Y3B1 194 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 UFC1Q9Y3C8 167 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FIS1Q9Y3D6 152 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ORC6Q9Y5N6 252 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 INSIG2Q9Y5U4 225 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FLVCR1Q9Y5Y0 555 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 NUBP2Q9Y5Y2 271 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 HEBP2Q9Y5Z4 205 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBIAD1Q9Y5Z9 338 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ALG5Q9Y673 324 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DNMT1P26358 1616 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PTPRGP23470 1445 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DCCP43146 1447 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 NPATQ14207 1427 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD109Q6YHK3 1445 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMG6Q86US8 1419 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PDS5BQ9NTI5 1447 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 EIF4G3O43432 1585 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ROCK2O75116 1388 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CARMIL3Q8ND23 1372 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARAP3Q8WWN8 1544 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 DCAF1Q9Y4B6 1507 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 THSD7AQ9UPZ6 1657 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TAF1LQ8IZX4 1826 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 NFASCO94856 1347 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCDC171Q6TFL3 1326 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCF20Q9UGU0 1960 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 DENND4BO75064 1496 aaPredicted RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 A2MP01023 1474 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 NCAPD3P42695 1498 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCOF1Q13428 1488 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRC2Q9UBG0 1479 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 KIF26BQ2KJY2 2108 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 THSD7BQ9C0I4 1608 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 RLFQ13129 1914 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGLV1-50A0A075B6I6 118 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3OR16-10A0A075B7F0 116 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A087WUJ7 227 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM26A0A096LP01 95 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV8-3A0A0A6YYJ7 113 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV8-1A0A0A6YYK1 113 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV19A0A0A6YYK7 116 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TGIF2-C20orf24A0A0A6YYL0 155 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 BORCS7-ASMTA0A0B4J1R7 106 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV6-1A0A0B4J1U7 121 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV2-26A0A0B4J1V2 119 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-74A0A0B4J1X5 117 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-35A0A0C4DH35 117 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A0X1KG70 313 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 EXOC1LA0A1B0GW35 172 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A1W2PNU3 283 aaPredicted RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 WI2-2373I1.2A0A1W2PRP0 233 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms