RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MED21Q13503 144 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 Q499Y3 187 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 ARSJQ5FYB0 599 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 OGFRL1Q5TC84 451 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 LAIR2Q6ISS4 152 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 NDUFA11Q86Y39 141 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 C1QL4Q86Z23 238 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 OSR2Q8N2R0 312 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 ZFP41Q8N8Y5 198 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 ZNF565Q8N9K5 539 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 SUMF2Q8NBJ7 301 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 MRGPRDQ8TDS7 321 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 FBLIM1Q8WUP2 373 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 AKR1E2Q96JD6 320 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 RBM14Q96PK6 669 aaKnown RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 ZNF184Q99676 751 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 SLC25A33Q9BSK2 321 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 DPCDQ9BVM2 203 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 BARHL1Q9BZE3 327 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 PCDHB16Q9NRJ7 776 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 IDI2-AS1Q9NZ38 188 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 AMMECR1Q9Y4X0 333 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 TRAV8-7A0A075B6U6 113 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 TRBV5-7A0A0A0MS05 114 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A18PA6NE21 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A16PA6NEW6 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 EFCAB10A6NFE3 127 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A20PA6NIJ5 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A9PA6NNJ1 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A12PA8MX19 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A5PA8MXJ8 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 J3QR06 171 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 GEMIN2O14893 280 aaKnown RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 ZNF780AO75290 641 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 PEX14O75381 377 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 OR7C1O76099 320 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 CSTBP04080 98 aaKnown RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 AMY1AP04745 511 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 AMY2AP04746 511 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A15PP0C7V4 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A13PP0C7W8 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A14PP0C7W9 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM90A24PP0C7X0 464 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 SERPINA2P20848 420 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 NFYBP25208 207 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 SSTR5P35346 364 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 TAS2R43P59537 309 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 ST3GAL4Q11206 333 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 DOC2BQ14184 412 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 RBM39Q14498 530 aaKnown RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 MPV17LQ2QL34 196 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 NSUN5P1Q3KNT7 163 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 CCDC144NLQ6NUI1 221 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 SLC16A12Q6ZSM3 486 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 C8orf59Q8N0T1 100 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 LYG1Q8N1E2 194 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 OR10A7Q8NGE5 316 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 TOMM40LQ969M1 308 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 OR14A2Q96R54 314 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 OR5M11Q96RB7 305 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 CITED2Q99967 270 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 PAK1IP1Q9NWT1 392 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 CHCHD3Q9NX63 227 aaKnown RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 CKLFQ9UBR5 152 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 ING4Q9UNL4 249 aa8.35□□□□□ -1.07
HMGXB3-205ENST00000514469 A0A1W2PP11 408 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 A0A1W2PPI3 338 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 G3V4G9 280 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 XPNPEP2O43895 674 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 CD1AP06126 327 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 MNDAP41218 407 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 BEAN1Q3B7T3 259 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 CAPSLQ8WWF8 208 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 LEAP2Q969E1 77 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 RPEQ96AT9 228 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 DERL3Q96Q80 235 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 S100A13Q99584 98 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 PLCXD1Q9NUJ7 323 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 FKBP14Q9NWM8 211 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 RCC2Q9P258 522 aaKnown RBP8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
HMGXB3-205ENST00000514469 TRAV39A0A0B4J263 110 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 PNMA8CA0A1B0GUJ8 204 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 TMEM30CPA0ZSE6 113 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 M0QZK8 103 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 MYL12BO14950 172 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 IGHV3-7P01780 117 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 GTF2F2P13984 249 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 GNG10P50151 68 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 RAB7AP51149 207 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 WNT4P56705 351 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 CD83Q01151 205 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 EMX1Q04741 257 aaPredicted RBP8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 MADCAM1Q13477 382 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 GPR176Q14439 515 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms