RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CCDC71LQ8N9Z2 235 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 SYT3Q9BQG1 590 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 RDH8Q9NYR8 311 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 GLS2Q9UI32 602 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 DUSP13Q9UII6 198 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 KCNIP3Q9Y2W7 256 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 ZSCAN5BA6NJL1 495 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 WNT9BO14905 357 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 IFNA7P01567 189 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
VCAN-211ENST00000513984 PSMB6P28072 239 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 ZNF345Q14585 488 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 TMEM187Q14656 261 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 OR2Z1Q8NG97 314 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 PRR7Q8TB68 274 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 DMRTA2Q96SC8 542 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 VRK1Q99986 396 aaPredicted RBP12.61□□□□□ -0.39
VCAN-211ENST00000513984 VKORC1Q9BQB6 163 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 SUCNR1Q9BXA5 334 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 ARL6Q9H0F7 186 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 METTL8Q9H825 291 aaKnown RBP12.61□□□□□ -0.39
VCAN-211ENST00000513984 UFSP2Q9NUQ7 469 aa12.61□□□□□ -0.39
VCAN-211ENST00000513984 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 MPTX1A8MV57 137 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 NPIPB11E5RHQ5 1161 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 EXOSC2Q13868 293 aaKnown RBP12.6□□□□□ -0.39
VCAN-211ENST00000513984 SMIM21Q3B7S5 101 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 PHLDA2Q53GA4 152 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 LRTM2Q8N967 370 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 NUP37Q8NFH4 326 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 OR10Z1Q8NGY1 313 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 OR10C1Q96KK4 312 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 C2orf50Q96LR7 162 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 MBNL3Q9NUK0 354 aaKnown RBP12.6□□□□□ -0.39
VCAN-211ENST00000513984 OR14J1Q9UGF5 321 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 WIPI2Q9Y4P8 454 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 A0A0D9SG52 128 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 RP2O75695 350 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 CFDP00746 253 aaPredicted RBP12.6□□□□□ -0.39
VCAN-211ENST00000513984 OR5AC1P0C628 307 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 GNRHRP30968 328 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 CFHR2P36980 270 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 RND3P61587 244 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 KLRB1Q12918 225 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 IL15RAQ13261 267 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 TMEM108Q6UXF1 575 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 OR11L1Q8NGX0 322 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 RND1Q92730 232 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 FAM210AQ96ND0 272 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 TAAR3PQ9P1P4 343 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 MBD2Q9UBB5 411 aa12.6□□□□□ -0.39
VCAN-211ENST00000513984 hCG_1807616A0A1W2PRN6 198 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 RNF222A6NCQ9 220 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 IFNL4K9M1U5 179 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 PSPNO60542 156 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 OR2F2O95006 317 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 HOXB5P09067 269 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 PTAFRP25105 342 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 CEBPDP49716 269 aaPredicted RBP12.59□□□□□ -0.39
VCAN-211ENST00000513984 OR2F1Q13607 317 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
VCAN-211ENST00000513984 VHLLQ6RSH7 139 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
VCAN-211ENST00000513984 KCNRGQ8N5I3 272 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 UBQLN2Q9UHD9 624 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 MAB21L2Q9Y586 359 aa12.59□□□□□ -0.39
VCAN-211ENST00000513984 IGKV1D-13A0A0B4J2D9 117 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 SRRM5B3KS81 715 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 GPR31O00270 319 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 DLL1O00548 723 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 IGKV1-13P0DP09 117 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 HMGN3Q15651 99 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 ACOT7LQ6ZUV0 252 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 OR10J5Q8NHC4 309 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 LRRC29Q8WV35 223 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 SECTM1Q8WVN6 248 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 MRPL37Q9BZE1 423 aaKnown RBP12.58□□□□□ -0.4
VCAN-211ENST00000513984 TRAPPC2LQ9UL33 140 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 MEMO1Q9Y316 297 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 POLEQ07864 2286 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 MPPED1O15442 326 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 THBDP07204 575 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 LYL1P12980 280 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 S100A1P23297 94 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 SELENOVP59797 346 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 HOXA4Q00056 320 aaPredicted RBP12.58□□□□□ -0.4
VCAN-211ENST00000513984 SP6Q3SY56 376 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 SLC35E4Q6ICL7 350 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 ZNF565Q8N9K5 539 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 GLYATL2Q8WU03 294 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 MRPL24Q96A35 216 aaKnown RBP12.58□□□□□ -0.4
VCAN-211ENST00000513984 MSI2Q96DH6 328 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms