RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 IFNL4K9M1U5 179 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 ETV2O00321 342 aaPredicted RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 AMBPP02760 352 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 RTP5Q14D33 572 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 C16orf82Q7Z2V1 217 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 ADPRHL1Q8NDY3 354 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 OR6X1Q8NH79 312 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 IL1F10Q8WWZ1 152 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 PCGF1Q9BSM1 259 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 NDUFAF3Q9BU61 184 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 ST3GAL6Q9Y274 331 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 G3V3Y1 287 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 TRAF3IP2O43734 574 aaPredicted RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 IFNA1P01562 189 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 FKBP2P26885 142 aaKnown RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 GALR1P47211 349 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 SUCLG1P53597 346 aaKnown RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 RAB4BP61018 213 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 NUTF2P61970 127 aaKnown RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 PAX5Q02548 391 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 TNFRSF9Q07011 255 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 RTL6Q6ICC9 239 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 OR8G2PQ6IF36 304 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 FSCN3Q9NQT6 498 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 SDK2Q58EX2 2172 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 IGLV3-32A0A0A0MS00 114 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 M0R135 149 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 CFIP05156 583 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 CD55P08174 381 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 OR4A8P0C604 315 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 HNF1AP20823 631 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 CHRNA7P36544 502 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 PTGDSP41222 190 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 LHX4Q969G2 390 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 CLDN23Q96B33 292 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 ZNF799Q96GE5 643 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 SGCZQ96LD1 299 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 C1orf147Q96MC9 270 aaPredicted RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 MRPL37Q9BZE1 423 aaKnown RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 LIME1Q9H400 295 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 AKIRIN1Q9H9L7 192 aaPredicted RBP8.35□□□□□ -1.07
VCAN-210ENST00000513960 SLC39A9Q9NUM3 307 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 OCIAD1Q9NX40 245 aa8.35□□□□□ -1.07
VCAN-210ENST00000513960 HSPB1P04792 205 aaKnown RBP8.34□□□□□ -1.07
VCAN-210ENST00000513960 SERPINE2P07093 398 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 METTL15P1P0C7V9 234 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 PATE4P0C8F1 98 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 GZMBP10144 247 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 HLA-BQ31612 363 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 SPSB3Q6PJ21 355 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 TOMM20LQ6UXN7 152 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 TBC1D26Q86UD7 250 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 CPAMD8Q8IZJ3 1885 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 UBALD1Q8TB05 177 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 TMEM171Q8WVE6 324 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 NOL4LQ96MY1 436 aaPredicted RBP8.34□□□□□ -1.07
VCAN-210ENST00000513960 C2orf88Q9BSF0 95 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 VCANP13611 3396 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 ZNF816-ZNF321PA0A0X1KG74 233 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 CYB5R3P00387 301 aaPredicted RBP8.34□□□□□ -1.07
VCAN-210ENST00000513960 OPN1MWP04001 364 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 OPN1MW2P0DN77 364 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 OPN1MW3P0DN78 364 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 PLCXD3Q63HM9 321 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 SLC25A47Q6Q0C1 308 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 SLC35E3Q7Z769 313 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 TMEM183AQ8IXX5 376 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 OR4F5Q8NH21 305 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 LYPD6BQ8NI32 183 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 SAP25Q8TEE9 199 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 RNF138Q8WVD3 245 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 OR4F4Q96R69 305 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 CALHM2Q9HA72 323 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 MSL2Q9HCI7 577 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 KCNS2Q9ULS6 477 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 GOLT1BQ9Y3E0 138 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 CBY1Q9Y3M2 126 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 PI4KAP42356 2102 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 NPIPA2E9PIF3 369 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 NPIPA3F8WFD2 350 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 TK1P04183 234 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 CST2P09228 141 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 GRB2P62993 217 aaKnown RBP8.34□□□□□ -1.07
VCAN-210ENST00000513960 PMP22Q01453 160 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 IQCJQ1A5X6 159 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 RAET1LQ5VY80 246 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 SLC16A14Q7RTX9 510 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 LYPD6Q86Y78 171 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 ELOVL1Q9BW60 279 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 GLRX2Q9NS18 164 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 P4HTMQ9NXG6 502 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 TP53TG5Q9Y2B4 290 aa8.34□□□□□ -1.07
VCAN-210ENST00000513960 PTRH2Q9Y3E5 179 aaKnown RBP8.34□□□□□ -1.07
VCAN-210ENST00000513960 WDR87Q6ZQQ6 2873 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 DHRS3O75911 302 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 COX5BP10606 129 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 S100GP29377 79 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 JOSD1Q15040 202 aaPredicted RBP8.33□□□□□ -1.08
VCAN-210ENST00000513960 TMEM41BQ5BJD5 291 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 CLDND2Q8NHS1 167 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms