RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 ZNF250P15622 560 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 RPS2P15880 293 aaKnown RBP11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 GLRXP35754 106 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 ZNF81P51508 661 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 GSG1LQ6UXU4 331 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 SGPP2Q8IWX5 399 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 FAM185AQ8N0U4 392 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 GAPTQ8N292 157 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 NEK7Q8TDX7 302 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 CYYR1Q96J86 154 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 DPCDQ9BVM2 203 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 NMES1Q9C002 83 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 SEBOXQ9HB31 216 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 JKAMPQ9P055 326 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 JMJD1CQ15652 2540 aa11.11□□□□□ -0.63
DEPDC1B-206ENST00000512452 ACANP16112 2415 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 TRAV24A0A0B4J272 114 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 A0A0G2JNJ9 132 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 CRYM-AS1A6NIL9 109 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 L7N2F9 121 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 MLNRO43193 412 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 RHBDL1O75783 438 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 NXPH2O95156 264 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 PTBP3O95758 552 aaKnown RBP11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 IGHV3-13P01766 116 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 TK1P04183 234 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 RPA2P15927 270 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 FCGR2CP31995 323 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 CD200P41217 278 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 KCNJ3P48549 501 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 HERV-K104P61576 105 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 SNRPD2P62316 118 aaKnown RBP11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 SUPT4H1P63272 117 aaKnown RBP11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 NKX6-1P78426 367 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 PDCD1Q15116 288 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 ALKBH6Q3KRA9 238 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 BRICD5Q6PL45 260 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 CCDC71LQ8N9Z2 235 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 OR10Z1Q8NGY1 313 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 MRPL30Q8TCC3 161 aaKnown RBP11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 CASTOR1Q8WTX7 329 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 DYRK2Q92630 601 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 ELMOD3Q96FG2 381 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 GALNT14Q96FL9 552 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 FAM210AQ96ND0 272 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 PDCD10Q9BUL8 212 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 FXYD6Q9H0Q3 95 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 WDR13Q9H1Z4 485 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 HEXA-AS1Q9H8Q6 139 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 C1orf123Q9NWV4 160 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 RASL12Q9NYN1 266 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 Q9UFV3 132 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 SLC23A1Q9UHI7 598 aa11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 KLF2Q9Y5W3 355 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1B-206ENST00000512452 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 NPIPB11E5RHQ5 1161 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 M0R1B8 84 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 CDIPTO14735 213 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 IFNA7P01567 189 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 GLRA1P23415 457 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 CFHR2P36980 270 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 RBMXP38159 391 aaKnown RBP11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 ZNF83P51522 516 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 OPCMLQ14982 345 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 Q6ZPA2 131 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 FAM90A1Q86YD7 464 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 OR4A4PQ8NGN8 299 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 ZNF488Q96MN9 340 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 RSRP1Q9BUV0 290 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 SUCNR1Q9BXA5 334 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 IL36RNQ9UBH0 155 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 TINAGQ9UJW2 476 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 PCDHB10Q9UN67 800 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
DEPDC1B-206ENST00000512452 TACC2O95359 2948 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 IGLV3-9A0A075B6K5 115 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 TRAV14DV4A0A0A6YYC5 116 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 PIGBOS1A0A0B4J2F0 54 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 A0A0D9SG52 128 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 EEF1E1-BLOC1S5C9J1V9 151 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 C16orf97H3BN30 126 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 IFNL4K9M1U5 179 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 TUSC2O75896 110 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 KNG1P01042 644 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 PPYP01298 95 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 ZNF44P15621 663 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 CXCL2P19875 107 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 LMO1P25800 156 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 S100A11P31949 105 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 FABP6P51161 128 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 KLF3P57682 345 aaPredicted RBP11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 SELENOVP59797 346 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 RND3P61587 244 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 HLA-DRB3P79483 266 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 BAMBIQ13145 260 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms