RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 TRIP13Q15645 432 aaPredicted RBP2.77□□□□□ -1.97
NUP54-209ENST00000510569 OR2B11Q5JQS5 317 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 FAM27D1Q5T7N8 215 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 HIST2H3PS2Q5TEC6 136 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 CST9Q5W186 159 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 HBMQ6B0K9 141 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 CYB5R2Q6BCY4 276 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 OR8G2PQ6IF36 304 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 OR52E8Q6IFG1 317 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 IFNEQ86WN2 208 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 ACOT4Q8N9L9 421 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 OR2M7Q8NG81 312 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 OR4F15Q8NGB8 312 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 OR56B4Q8NH76 319 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 ZNF502Q8TBZ5 544 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 PYROXD1Q8WU10 500 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 EEF1AKMT1Q8WVE0 214 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 TCTEX1D2Q8WW35 142 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 YIPF5Q969M3 257 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 RCN3Q96D15 328 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 DNAJC19Q96DA6 116 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 ZNF681Q96N22 645 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 MS4A4EQ96PG1 132 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 PFDN5Q99471 154 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 CCDC90BQ9GZT6 254 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 ARV1Q9H2C2 271 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 MAP1LC3AQ9H492 121 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 PRORYQ9H606 182 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 UGT1A8Q9HAW9 530 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 BIN3Q9NQY0 253 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 SPANXA1Q9NS26 97 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 VPS29Q9UBQ0 182 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 HSPB11Q9Y547 144 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 SNX10Q9Y5X0 201 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 SBF1O95248 1867 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 NAV1Q8NEY1 1877 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 NRXN2Q9P2S2 1712 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 CNTNAP1P78357 1384 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 DICER1Q9UPY3 1922 aaKnown RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 A0A1B0GW55 424 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 ZNF878C9JN71 531 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 ANKRD63C9JTQ0 380 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 TAAR5O14804 337 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 PHYHO14832 338 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 FABP7O15540 132 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 PFDN1O60925 122 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 LYPLA1O75608 230 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 EIF3GO75821 320 aaKnown RBP eCLIP2.76□□□□□ -1.97
NUP54-209ENST00000510569 CNMDO75829 334 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 SULT1C4O75897 302 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 S1PR2O95136 353 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 GCGP01275 180 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 IFNA1P01562 189 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 GYPCP04921 128 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 GIPP09681 153 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 ACSM4P0C7M7 580 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 FAM228BP0C875 321 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 DUX4L2P0CJ85 424 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 DUX4L3P0CJ86 424 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 DUX4L5P0CJ88 424 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 DUX4L6P0CJ89 424 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 DUX4L7P0CJ90 424 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 SMIM6P0DI80 62 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 IFI30P13284 250 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 SERPINB5P36952 375 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 RBMXP38159 391 aaKnown RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 RPS9P46781 194 aaKnown RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 ZNF121P58317 390 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 TAS2R41P59536 307 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 RAB2AP61019 212 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 RAP1BP61224 184 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 MRPS11P82912 194 aaKnown RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 IL5RAQ01344 420 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 SP4Q02446 784 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 RPL18AQ02543 176 aaKnown RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 PRSS8Q16651 343 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 LRRC26Q2I0M4 334 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 HLA-DRB5Q30154 266 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 N4BP2L1Q5TBK1 243 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 WDR74Q6RFH5 385 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 DUX4L9Q6RFH8 374 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 HSD17B13Q7Z5P4 300 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 SKA3Q8IX90 412 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 BPIFB2Q8N4F0 458 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 ZNF676Q8N7Q3 588 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 ARIH2OSQ8N7S6 290 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 SLC26A10Q8NG04 563 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 OR8G5Q8NG78 346 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 OR52E4Q8NGH9 312 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 OR5B3Q8NH48 314 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 STOML3Q8TAV4 291 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 PIFOQ8TCI5 191 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 TMEM234Q8WY98 164 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 NDRG1Q92597 394 aaKnown RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 UCN3Q969E3 161 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 CPNE2Q96FN4 548 aaPredicted RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 BTF3L4Q96K17 158 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 HSFY1Q96LI6 401 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms