RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 EFCAB10A6NFE3 127 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 ANKRD65E5RJM6 399 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 GEMIN2O14893 280 aaKnown RBP14.34□□□□□ -0.11
TPM3-220ENST00000509601 BRS3P32247 399 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 KCNJ3P48549 501 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 PPP3R1P63098 170 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 MED21Q13503 144 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 RIPK1Q13546 671 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 TMEM95Q3KNT9 176 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 C8orf59Q8N0T1 100 aaPredicted RBP14.34□□□□□ -0.11
TPM3-220ENST00000509601 LYG1Q8N1E2 194 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 OR9G1Q8NH87 305 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 MRGPRDQ8TDS7 321 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 CREB3L1Q96BA8 519 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 OR5M11Q96RB7 305 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 ZNF184Q99676 751 aaPredicted RBP14.34□□□□□ -0.11
TPM3-220ENST00000509601 DPCDQ9BVM2 203 aaPredicted RBP14.34□□□□□ -0.11
TPM3-220ENST00000509601 IDI2-AS1Q9NZ38 188 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 CNOT2Q9NZN8 540 aaKnown RBP14.34□□□□□ -0.11
TPM3-220ENST00000509601 ADARB2-AS1A8MUL3 147 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 J3QR06 171 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 PIN1P1O15428 100 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 IL1AP01583 271 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 IGHV3-7P01780 117 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 AMY1AP04745 511 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 AMY2AP04746 511 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 GLP1RP43220 463 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 RBM11P57052 281 aaKnown RBP14.33□□□□□ -0.12
TPM3-220ENST00000509601 C16orf82Q7Z2V1 217 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 LYPD6Q86Y78 171 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 TFAP2CQ92754 450 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 LEAP2Q969E1 77 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 RBM14Q96PK6 669 aaKnown RBP14.33□□□□□ -0.12
TPM3-220ENST00000509601 MMP28Q9H239 520 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 LIN7BQ9HAP6 207 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 FKBP14Q9NWM8 211 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 PSG11Q9UQ72 335 aa14.33□□□□□ -0.12
TPM3-220ENST00000509601 PLXNB1O43157 2135 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A18PA6NE21 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A16PA6NEW6 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A20PA6NIJ5 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A9PA6NNJ1 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A12PA8MX19 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A5PA8MXJ8 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 H3BUI4 141 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FBXO24O75426 580 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 OR7C1O76099 320 aaPredicted RBP14.32□□□□□ -0.12
TPM3-220ENST00000509601 OPN1MWP04001 364 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 CSTBP04080 98 aaKnown RBP14.32□□□□□ -0.12
TPM3-220ENST00000509601 CD1AP06126 327 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A15PP0C7V4 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A13PP0C7W8 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A14PP0C7W9 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 FAM90A24PP0C7X0 464 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 OPN1MW2P0DN77 364 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 OPN1MW3P0DN78 364 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 SERPINA2P20848 420 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 CEACAM3P40198 252 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 C1QL4Q86Z23 238 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 NANOGP1Q8N7R0 232 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 BPIFB6Q8NFQ5 453 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 OR10A7Q8NGE5 316 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 OR14A2Q96R54 314 aa14.32□□□□□ -0.12
TPM3-220ENST00000509601 CITED2Q99967 270 aaPredicted RBP14.32□□□□□ -0.12
TPM3-220ENST00000509601 PNMA8CA0A1B0GUJ8 204 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 OOSP1A8MZH6 123 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 ZNF780AO75290 641 aaPredicted RBP14.31□□□□□ -0.12
TPM3-220ENST00000509601 FSTP19883 344 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 GZMHP20718 246 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 SSTR5P35346 364 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 VDAC2P45880 294 aaPredicted RBP14.31□□□□□ -0.12
TPM3-220ENST00000509601 EMX1Q04741 257 aaPredicted RBP14.31□□□□□ -0.12
TPM3-220ENST00000509601 DIAPH2-AS1Q14236 149 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 RBM39Q14498 530 aaKnown RBP14.31□□□□□ -0.12
TPM3-220ENST00000509601 LTC4SQ16873 150 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 NSUN5P1Q3KNT7 163 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 SLC22A6Q4U2R8 563 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 SLC16A12Q6ZSM3 486 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 THNSL2Q86YJ6 484 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 S100A13Q99584 98 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 SLC25A33Q9BSK2 321 aa14.31□□□□□ -0.12
TPM3-220ENST00000509601 PAK1IP1Q9NWT1 392 aaPredicted RBP14.31□□□□□ -0.12
TPM3-220ENST00000509601 C15orf65H3BRN8 121 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 OR2F2O95006 317 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 GTF2F2P13984 249 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 CELP19835 753 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 TAS2R43P59537 309 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 MPV17LQ2QL34 196 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 AHSA2Q719I0 299 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 LINC00596Q86U02 117 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 CDH26Q8IXH8 852 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 STX19Q8N4C7 294 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 MUL1Q969V5 352 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 DERL3Q96Q80 235 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 PCDHB16Q9NRJ7 776 aa14.3□□□□□ -0.12
TPM3-220ENST00000509601 NKX1-2Q9UD57 310 aaPredicted RBP14.3□□□□□ -0.12
TPM3-220ENST00000509601 SH2D7A6NKC9 451 aaPredicted RBP14.29□□□□□ -0.12
TPM3-220ENST00000509601 G3V4G9 280 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 MT-ND4P03905 459 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 MAS1P04201 325 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms