RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 MEOX1P50221 254 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 GNG3P63215 75 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 CLINT1Q14677 625 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 LINC00518Q8N0U6 118 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 LFNGQ8NES3 379 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 BIN3Q9NQY0 253 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 LYRM2Q9NU23 88 aaPredicted RBP15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 KMT2EQ8IZD2 1858 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 A0A1W2PNU3 283 aaPredicted RBP15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 LNP1A1A4G5 178 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 CLEC18AA5D8T8 446 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 KLRC4-KLRK1H3BQV0 150 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 PITX3O75364 302 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 SP1P08047 785 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 ASCL1P50553 236 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 CLN3Q13286 438 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 C3AR1Q16581 482 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 CLEC18CQ8NCF0 446 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 FAM213BQ8TBF2 198 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 MRPL30Q8TCC3 161 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 LHX6Q9UPM6 363 aa15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 KLF2Q9Y5W3 355 aaPredicted RBP15.33■□□□□ 0.04
CCHCR1-228ENST00000509552 IGKV1-6A0A0C4DH72 117 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 IGSF23A1L1A6 192 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 HS3ST1O14792 307 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 HSPA12AO43301 675 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 FAM58AQ8N1B3 248 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 OR5D13Q8NGL4 314 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 LILRB1Q8NHL6 650 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 NANOS1Q8WY41 292 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 IL22RA2Q969J5 263 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 MAGT1Q9H0U3 335 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 RPS10P5Q9NQ39 176 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 MEX3AA1L020 520 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 H0Y980 276 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 IL24Q13007 206 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 NMSQ5H8A3 153 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 CXorf66Q5JRM2 361 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 TMEM252Q8N6L7 170 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 C15orf54Q8N8G6 183 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 KDF1Q8NAX2 398 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 ZNF488Q96MN9 340 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 IP6K3Q96PC2 410 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 GPHA2Q96T91 129 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 C12orf49Q9H741 205 aa15.32■□□□□ 0.04
CCHCR1-228ENST00000509552 AHCTF1Q8WYP5 2266 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 FREM2Q5SZK8 3169 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 TRBV6-6A0A0A6YYG2 114 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 PIGBOS1A0A0B4J2F0 54 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 COLCA2A8K830 154 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 UMAD1C9J7I0 102 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 WRBO00258 174 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 MMP9P14780 707 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 OMGP23515 440 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 PAX6P26367 422 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 WNT5AP41221 380 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 SLC10A1Q14973 349 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 HIKESHIQ53FT3 197 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 OR2G3Q8NGZ4 309 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 OR10J5Q8NHC4 309 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 RDH5Q92781 318 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 SCRT1Q9BWW7 348 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 PRSS50Q9UI38 385 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 K7N7A8 449 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 PGLYRP1O75594 196 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 HOXA1P49639 335 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 AKR1D1P51857 326 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 DEFB123Q8N688 67 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 OR1K1Q8NGR3 316 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 FER1L6-AS2Q96M78 137 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 PKIBQ9C010 78 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 OR51B6Q9H340 312 aa15.31■□□□□ 0.04
CCHCR1-228ENST00000509552 TNFSF12O43508 249 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 MT-CO3P00414 261 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 ATP6V0CP27449 155 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 ID3Q02535 119 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 BAXQ07812 192 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 PCSK4Q6UW60 755 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 IL22RA1Q8N6P7 574 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 SLC35B3Q9H1N7 401 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 KCNJ16Q9NPI9 418 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 OR2W1Q9Y3N9 320 aa15.3■□□□□ 0.04
CCHCR1-228ENST00000509552 TRAV24A0A0B4J272 114 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 M0R036 132 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 HLA-DRB3P79483 266 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 AWAT1Q58HT5 328 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 OR2T2Q6IF00 324 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 C20orf204Q6ZNR8 217 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 OR5C1Q8NGR4 320 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 C14orf79Q96F83 325 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 PROB1E7EW31 1015 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 LILRA1O75019 489 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 SNRNP70P08621 437 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 CD46P15529 392 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 ZNF44P15621 663 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 CA6P23280 308 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 F2RP25116 425 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 LMO1P25800 156 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 FBXW9Q5XUX1 488 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 ETV3LQ6ZN32 361 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms