RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 REG1BP48304 166 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 FHL3Q13643 280 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 DOC2BQ14184 412 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 CDK5R1Q15078 307 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 PAN3Q58A45 887 aaKnown RBP12.5□□□□□ -0.41
CXCL1-202ENST00000509101 OVCH2Q7RTZ1 564 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 MOB3BQ86TA1 216 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 ZNF565Q8N9K5 539 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 Q8N9W7 124 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 OR51T1Q8NGJ9 327 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 RFESDQ8TAC1 157 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 MRGPRDQ8TDS7 321 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 EAF1Q96JC9 268 aaPredicted RBP12.5□□□□□ -0.41
CXCL1-202ENST00000509101 KRT84Q9NSB2 600 aa12.5□□□□□ -0.41
CXCL1-202ENST00000509101 WARS2Q9UGM6 360 aaKnown RBP12.5□□□□□ -0.41
CXCL1-202ENST00000509101 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 ZAR1LA6NP61 321 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 CCRL2O00421 344 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 RRP9O43818 475 aaKnown RBP12.49□□□□□ -0.41
CXCL1-202ENST00000509101 C21orf33P30042 268 aaPredicted RBP12.49□□□□□ -0.41
CXCL1-202ENST00000509101 SSTR5P35346 364 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 ISL1P61371 349 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
CXCL1-202ENST00000509101 EBI3Q14213 229 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 ATP6AP1Q15904 470 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 AMIGO2Q86SJ2 522 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 IZUMO1Q8IYV9 350 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 Q8N6K4 173 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 OR11H1Q8NG94 326 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 OR2G2Q8NGZ5 317 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 OR10AC1Q8NH08 325 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
CXCL1-202ENST00000509101 RHOFQ9HBH0 211 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 AP4S1Q9Y587 144 aa12.49□□□□□ -0.41
CXCL1-202ENST00000509101 HTR1FP30939 366 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 CFHR3Q02985 330 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 ZNF85Q03923 595 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 SAXO1Q8IYX7 474 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 OR51A4Q8NGJ6 313 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 NRBF2Q96F24 287 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 NR1H4Q96RI1 486 aaPredicted RBP12.48□□□□□ -0.41
CXCL1-202ENST00000509101 MBOAT4Q96T53 435 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
CXCL1-202ENST00000509101 TRAV39A0A0B4J263 110 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 TRAV24A0A0B4J272 114 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 NPIPB11E5RHQ5 1161 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 MPZL2O60487 215 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 CIB2O75838 187 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 IGHG4P01861 327 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 MT-ND2P03891 347 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 GAPDHP04406 335 aaKnown RBP12.47□□□□□ -0.41
CXCL1-202ENST00000509101 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 VDAC1P21796 283 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 ATP6V1E1P36543 226 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 RSBN1Q5VWQ0 802 aaPredicted RBP12.47□□□□□ -0.41
CXCL1-202ENST00000509101 OR13C3Q8NGS6 347 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 OR2T10Q8NGZ9 312 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 ISYNA1Q9NPH2 558 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 MYRFQ9Y2G1 1151 aa12.47□□□□□ -0.41
CXCL1-202ENST00000509101 EBAG9O00559 213 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 HCKP08631 526 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 FRMD6-AS1P0C7T7 363 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 FASP25445 335 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 PSMB8P28062 276 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 MTNR1BP49286 362 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 INSL3P51460 131 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 NANOS3P60323 173 aaKnown RBP12.46□□□□□ -0.41
CXCL1-202ENST00000509101 ZP1P60852 638 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 FAM27D1Q5T7N8 215 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 ASPHD1Q5U4P2 390 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 CNIH3Q8TBE1 160 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 PYDC1Q8WXC3 89 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 RBMXL1Q96E39 390 aaKnown RBP12.46□□□□□ -0.41
CXCL1-202ENST00000509101 RNFT2Q96EX2 444 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 S1PR3Q99500 378 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 RASL11BQ9BPW5 248 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 BARHL1Q9BZE3 327 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 ZMAT4Q9H898 229 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 GNB4Q9HAV0 340 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 FRRS1LQ9P0K9 344 aa12.46□□□□□ -0.41
CXCL1-202ENST00000509101 ISG15P05161 165 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 OR8U8P0C7N1 319 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 DBTP11182 482 aaKnown RBP12.45□□□□□ -0.42
CXCL1-202ENST00000509101 ZSCAN26Q16670 478 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 LPCAT4Q643R3 524 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 SLC16A12Q6ZSM3 486 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 KCTD7Q96MP8 289 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 OR5B12Q96R08 314 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 PLSCR3Q9NRY6 295 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 HYDINQ4G0P3 5121 aa12.45□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF736B4DX44 427 aaPredicted RBP12.44□□□□□ -0.42
CXCL1-202ENST00000509101 G3V2T6 193 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 H3BNX3 289 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms