RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PRRT1Q99946 306 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 MS4A6AQ9H2W1 248 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SLC22A7Q9Y694 548 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CENPVL1A0A0U1RR11 272 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CENPVL3A0A0U1RRI6 287 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM269A0A1B0GVZ9 245 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 FRG2CA6NGY1 282 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 A6NIN4 97 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 EEF1E1O43324 174 aaKnown RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 EMC8O43402 210 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CXorf1O96002 111 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 HPRT1P00492 218 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 PI3P19957 117 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GABRR1P24046 479 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CD70P32970 193 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 MAXP61244 160 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GGTLC2Q14390 218 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 RGNQ15493 299 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 TAB1Q15750 504 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 COA6Q5JTJ3 125 aaKnown RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SLC18B1Q6NT16 456 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF549Q6P9A3 640 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 UNQ6126/PRO20091Q6UXV3 157 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 PAQR4Q8N4S7 273 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 OR4K15Q8NH41 348 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 ATOH8Q96SQ7 321 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 MARVELD1Q9BSK0 173 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 RSG1Q9BU20 258 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 G6PC3Q9BUM1 346 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 QTRT1Q9BXR0 403 aaKnown RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 ENKD1Q9H0I2 346 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 LRRK1Q38SD2 2015 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CKAP5Q14008 2032 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SMIM9A6NGZ8 99 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 AGPAT2O15120 278 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 HCRTR1O43613 425 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 FCGR2CP31995 323 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 APLNRP35414 380 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 HNRNPA0Q13151 305 aaKnown RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 LINC01620Q4KN68 170 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 C9orf64Q5T6V5 341 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 PARM1Q6UWI2 310 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ZFP41Q8N8Y5 198 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CD200R1Q8TD46 325 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 AGAP11Q8TF27 550 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 EBPLQ9BY08 206 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ZDHHC4Q9NPG8 344 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 IGLV5-45A0A087WSX0 123 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 BORCS7-ASMTA0A0B4J1R7 106 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CEACAM18A8MTB9 384 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CDIPTO14735 213 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 OR12D1P0DN82 309 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 JUNBP17275 347 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CCR2P41597 374 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 RRAS2P62070 204 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 LSM6P62312 80 aaKnown RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CACNG7P62955 275 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 KCNJ8Q15842 424 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 HENMT1Q5T8I9 393 aaKnown RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 IL34Q6ZMJ4 242 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 Q6ZNX1 250 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CT55Q8WUE5 264 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SECTM1Q8WVN6 248 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF778Q96MU6 729 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SLC7A10Q9NS82 523 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 GMPR2Q9P2T1 348 aaKnown RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 THAP10Q9P2Z0 257 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF629Q9UEG4 869 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 TIMM22Q9Y584 194 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SLC25A15Q9Y619 301 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 FAM90A10PA6NDY2 464 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SLC17A2O00624 439 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 COX7A2P2O60397 106 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ALOX5APP20292 161 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 NUDT1P36639 197 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 P2RY2P41231 377 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 FGF8P55075 233 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 IHHQ14623 411 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 C1QL4Q86Z23 238 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 RNF175Q8N4F7 328 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 BEST4Q8NFU0 473 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 OR52N4Q8NGI2 321 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 OR10G4Q8NGN3 311 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 NEU4Q8WWR8 484 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 RBPMSQ93062 196 aaKnown RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 FCRL1Q96LA6 429 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SLC25A2Q9BXI2 301 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CHST5Q9GZS9 411 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 IKZF5Q9H5V7 419 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SLC17A6Q9P2U8 582 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 IGHV2-70DA0A0C4DH43 119 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 A0A0G2JND7 137 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 J3KT08 172 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CXCL13O43927 109 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 THY1P04216 161 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SRP14P37108 136 aaKnown RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 VHLP40337 213 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SPINT3P49223 89 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM50BP56557 158 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 TAS2R30P59541 319 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms