RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TRBV23-1A0A0A0MS06 115 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A1B0GV50 99 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A1B0GX30 115 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 H0YL77 283 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 ADAM20O43506 726 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 SPRY1O43609 319 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 SOX15O60248 233 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 MBP02144 154 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 TRGC2P03986 189 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 LCATP04180 440 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 DBHP09172 617 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 CXCL1P09341 107 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 METTL15P1P0C7V9 234 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 TRGC1P0CF51 173 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 CRYGSP22914 178 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 GNRHRP30968 328 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 CCKARP32238 428 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 CEACAM6P40199 344 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 PTGDSP41222 190 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 NPBWR2P48146 333 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 RRADP55042 308 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 DSCR4P56555 118 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 NXPH1P58417 271 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 RAB11AP62491 216 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 JOSD1Q15040 202 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 SHHQ15465 462 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 RAB30Q15771 203 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 ACOT6Q3I5F7 207 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 NMSQ5H8A3 153 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 TSPO2Q5TGU0 170 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 PLCXD3Q63HM9 321 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 SP5Q6BEB4 398 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 CLEC9AQ6UXN8 241 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 BEND2Q8NDZ0 799 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 Q8NFD4 153 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR10A7Q8NGE5 316 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 CPT1CQ8TCG5 803 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 THAP3Q8WTV1 239 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 KCNE4Q8WWG9 221 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 RELTQ969Z4 430 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 NABP1Q96AH0 204 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 LURAP1Q96LR2 239 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 TP53RKQ96S44 253 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 AGMATQ9BSE5 352 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 C2orf88Q9BSF0 95 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 RBM24Q9BX46 236 aaKnown RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 GPR87Q9BY21 358 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 PRDM13Q9H4Q3 707 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 SRD5A3Q9H8P0 318 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 GNG13Q9P2W3 67 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 NAT8Q9UHE5 227 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 RARRES3Q9UL19 164 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 CA14Q9ULX7 337 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 TIMM9Q9Y5J7 89 aa4.28□□□□□ -1.72
HMGB3P16-201ENST00000508037 TGIF2-C20orf24A0A0A6YYL0 155 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGHV1OR15-9A0A0B4J2B8 117 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGHV3-20A0A0C4DH32 117 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 IFITM10A6NMD0 228 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 CD300LBA8K4G0 201 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 RNF212BA8MTL3 300 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF727A8MUV8 499 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 C9J4A7 227 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 PPP5D1E7EU14 171 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 PROB1E7EW31 1015 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM250H0YL14 139 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 LINC01565O15544 149 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 SYNGR3O43761 229 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 ANGPTL7O43827 346 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 CHST1O43916 411 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 TUSC2O75896 110 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR2J2O76002 312 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 HLA-HP01893 362 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 SERPINE2P07093 398 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 FABP4P15090 132 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 KLK2P20151 261 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 RAB4AP20338 218 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 OMGP23515 440 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 SRP14P37108 136 aaKnown RBP4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 PSMB3P49720 205 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 FAM3BP58499 235 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 ERVFRD-1P60508 538 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 SPCS3P61009 180 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 CCL20P78556 96 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 RNPS1Q15287 305 aaKnown RBP4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 ATP6V1FQ16864 119 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM241Q24JQ0 296 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 SNAI3Q3KNW1 292 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 KRTAP27-1Q3LI81 207 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 PIGYQ3MUY2 71 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 NRN1LQ496H8 165 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM41BQ5BJD5 291 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 RIPPLY2Q5TAB7 128 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 RAET1LQ5VY80 246 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 NCR3LG1Q68D85 454 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 KCNIP4Q6PIL6 250 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 SPNS3Q6ZMD2 512 aa4.27□□□□□ -1.73
HMGB3P16-201ENST00000508037 SHISA6Q6ZSJ9 500 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms