RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GLIPR1P48060 266 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 TMEM50BP56557 158 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 PAX8Q06710 450 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 RSBN1Q5VWQ0 802 aaPredicted RBP16.57■□□□□ 0.24
USP53-203ENST00000507597 BRICD5Q6PL45 260 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 ZNF497Q6ZNH5 498 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 CMSS1Q9BQ75 279 aaKnown RBP16.57■□□□□ 0.24
USP53-203ENST00000507597 C19orf12Q9NSK7 152 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 RABL2AQ9UBK7 228 aaPredicted RBP16.57■□□□□ 0.24
USP53-203ENST00000507597 OPN4Q9UHM6 478 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 KIF25Q9UIL4 384 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 RABL2BQ9UNT1 228 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 A3GALT2U3KPV4 340 aa16.57■□□□□ 0.24
USP53-203ENST00000507597 MALRD1Q5VYJ5 2156 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 ZNF729A6NN14 1252 aaPredicted RBP16.56■□□□□ 0.24
USP53-203ENST00000507597 XRCC3O43542 346 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 FCN3O75636 299 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 TOX4O94842 621 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 LY6G6DO95868 133 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 MT-ND4P03905 459 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 ARF6P62330 175 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 ARFRP1Q13795 201 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 PNLIPRP3Q17RR3 467 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 CDNFQ49AH0 187 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 MOB1BQ7L9L4 216 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 ZNF554Q86TJ5 538 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 FGFRL1Q8N441 504 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 MCFD2Q8NI22 146 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 COQ2Q96H96 371 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 SULT4A1Q9BR01 284 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 DCUN1D5Q9BTE7 237 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 MMP27Q9H306 513 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 METTL8Q9H825 291 aaKnown RBP16.56■□□□□ 0.24
USP53-203ENST00000507597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP53-203ENST00000507597 CR1P17927 2039 aa16.56■□□□□ 0.24
USP53-203ENST00000507597 AKAP9Q99996 3911 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 FOXI3A8MTJ6 420 aaPredicted RBP16.55■□□□□ 0.24
USP53-203ENST00000507597 S100A5P33763 92 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 GLP1RP43220 463 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 ERVFRD-1P60508 538 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 PLA2G7Q13093 441 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 SCGB2A2Q13296 93 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 TMEM69Q5SWH9 247 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 OR52W1Q6IF63 320 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 TPRX1Q8N7U7 411 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 PLPPR1Q8TBJ4 325 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 DACT3Q96B18 629 aaPredicted RBP16.55■□□□□ 0.24
USP53-203ENST00000507597 SLC25A38Q96DW6 304 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 WDFY2Q96P53 400 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 C6orf62Q9GZU0 229 aaPredicted RBP16.55■□□□□ 0.24
USP53-203ENST00000507597 C12orf4Q9NQ89 552 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 DOCK11Q5JSL3 2073 aa16.55■□□□□ 0.24
USP53-203ENST00000507597 TRAV18A0A075B6X5 111 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 A6NHS1 94 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 SPINT2O43291 252 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 ORC5O43913 435 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 HPGDSO60760 199 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 CLPXO76031 633 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 TPPPO94811 219 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 GNB3P16520 340 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 GNG2P59768 71 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 TMEM30BQ3MIR4 351 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 PLAC9Q5JTB6 97 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 NCR3LG1Q68D85 454 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 METAP1DQ6UB28 335 aaPredicted RBP16.54■□□□□ 0.24
USP53-203ENST00000507597 GAPTQ8N292 157 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 OR10A7Q8NGE5 316 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 SLIRPQ9GZT3 109 aaKnown RBP16.54■□□□□ 0.24
USP53-203ENST00000507597 HEXA-AS1Q9H8Q6 139 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 ZNF581Q9P0T4 197 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 AK3Q9UIJ7 227 aa16.54■□□□□ 0.24
USP53-203ENST00000507597 MFNGO00587 321 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 CDK2P24941 298 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 CR1LQ2VPA4 569 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 MOGAT2Q3SYC2 334 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 HACD4Q5VWC8 232 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 BAIAP2L2Q6UXY1 529 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 NANPQ8TBE9 248 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 PCGF1Q9BSM1 259 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 VPS13CQ709C8 3753 aa16.53■□□□□ 0.24
USP53-203ENST00000507597 TRBV6-6A0A0A6YYG2 114 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 KBTBD11-OT1A0A1B0GTJ5 212 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 C17orf98A8MV24 154 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 PRTN3P24158 256 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 CBX5P45973 191 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 BPIFB3P59826 476 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 GUCA2AQ02747 115 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 KRTAP1-1Q07627 177 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 ZNF273Q14593 569 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 ZNF260Q3ZCT1 412 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 OR4K15Q8NH41 348 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 SETD6Q8TBK2 473 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 MRGPRDQ8TDS7 321 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 CCDC107Q8WV48 283 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 TMPRSS13Q9BYE2 586 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 NXF2Q9GZY0 626 aaKnown RBP16.52■□□□□ 0.24
USP53-203ENST00000507597 UNKLQ9H9P5 680 aaKnown RBP16.52■□□□□ 0.24
USP53-203ENST00000507597 CDC42EP3Q9UKI2 254 aa16.52■□□□□ 0.24
USP53-203ENST00000507597 FLNAP21333 2647 aaKnown RBP16.52■□□□□ 0.23
USP53-203ENST00000507597 NAPSAO96009 420 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms