RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 RBFOX1Q9NWB1 397 aaKnown RBP5.38□□□□□ -1.55
VCAN-207ENST00000507162 TAS2R1Q9NYW7 299 aa5.38□□□□□ -1.55
VCAN-207ENST00000507162 CALYQ9NYX4 217 aa5.38□□□□□ -1.55
VCAN-207ENST00000507162 MYRFQ9Y2G1 1151 aa5.38□□□□□ -1.55
VCAN-207ENST00000507162 FAM32AQ9Y421 112 aaKnown RBP5.38□□□□□ -1.55
VCAN-207ENST00000507162 SELENOKQ9Y6D0 94 aa5.38□□□□□ -1.55
VCAN-207ENST00000507162 MAGEB3O15480 346 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 OR2H2O95918 312 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 TRGV3P03979 118 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 PRKACAP17612 351 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 SPI1P17947 270 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 HTR1FP30939 366 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 MECP2P51608 486 aaKnown RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 CDC42P60953 191 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 TMEM267Q0VDI3 215 aaPredicted RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 CYLC2Q14093 348 aaPredicted RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 LRRC36Q1X8D7 754 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 IFI44LQ53G44 452 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 SOHLH1Q5JUK2 328 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 LIN54Q6MZP7 749 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 ERICH5Q6P6B1 374 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 SLC16A13Q7RTY0 426 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 TRPM8Q7Z2W7 1104 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 LAX1Q8IWV1 398 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 POM121L12Q8N7R1 296 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 ZNF565Q8N9K5 539 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 TMEM104Q8NE00 496 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 DNAAF1Q8NEP3 725 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 DYNLRB2Q8TF09 96 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 CHAC2Q8WUX2 184 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 OTULINQ96BN8 352 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 WDR89Q96FK6 387 aaPredicted RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 COQ2Q96H96 371 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 OSBPL10Q9BXB5 764 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 ROPN1BQ9BZX4 212 aaPredicted RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 ANKRD19PQ9H560 264 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 ROPN1Q9HAT0 212 aaPredicted RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 EXOSC4Q9NPD3 245 aaKnown RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 CNOT2Q9NZN8 540 aaKnown RBP5.37□□□□□ -1.55
VCAN-207ENST00000507162 FBXL7Q9UJT9 491 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 TP53TG1Q9Y2A0 90 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 GSTK1Q9Y2Q3 226 aa5.37□□□□□ -1.55
VCAN-207ENST00000507162 IGLV2-18A0A075B6J9 118 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 MEIKINA0A087WXM9 373 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 A0A0U1RQV5 110 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 TMEM269A0A1B0GVZ9 245 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 A0A1W2PRQ8 180 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 ENTPD6O75354 484 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 LYNP07948 512 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 ZNF44P15621 663 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 BCL3P20749 454 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 C21orf33P30042 268 aaPredicted RBP5.36□□□□□ -1.55
VCAN-207ENST00000507162 NUDT2P50583 147 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 BLVRAP53004 296 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 MFAP2P55001 183 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 DGCR6Q14129 220 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 ATXN7L3Q14CW9 347 aaPredicted RBP5.36□□□□□ -1.55
VCAN-207ENST00000507162 C21orf62-AS1Q17RA5 79 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 ACTBL2Q562R1 376 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 FAHD1Q6P587 224 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 UNQ5815/PRO19632Q6UWF5 114 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 Q6ZWC4 215 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 OR13A1Q8NGR1 328 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 FBLIM1Q8WUP2 373 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 RTN4IP1Q8WWV3 396 aaPredicted RBP5.36□□□□□ -1.55
VCAN-207ENST00000507162 RITA1Q96K30 269 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 SH3GL1Q99961 368 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 EBF4Q9BQW3 602 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 ZNF251Q9BRH9 671 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 PBOV1Q9GZY1 135 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 PPIL3Q9H2H8 161 aaKnown RBP5.36□□□□□ -1.55
VCAN-207ENST00000507162 EGLN3Q9H6Z9 239 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 SEBOXQ9HB31 216 aaPredicted RBP5.36□□□□□ -1.55
VCAN-207ENST00000507162 GTF2A1LQ9UNN4 478 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 ENPP4Q9Y6X5 453 aa5.36□□□□□ -1.55
VCAN-207ENST00000507162 TRAV39A0A0B4J263 110 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 RGS16O15492 202 aaPredicted RBP5.35□□□□□ -1.55
VCAN-207ENST00000507162 DHRS3O75911 302 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 DIRAS1O95057 198 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 CYB5AP00167 134 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 HLA-DRB1P01911 266 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 CGB3P0DN86 165 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 CGB7P0DN87 165 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 IL3RAP26951 378 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 APOC4P55056 127 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 KLF10Q13118 480 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 CRMP1Q14194 572 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 ZNF146Q15072 292 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 MRGPRG-AS1Q2M3A8 158 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 RPEL1Q2QD12 228 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 DEFB114Q30KQ6 69 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 LGALS9BQ3B8N2 356 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 TMEM42Q69YG0 159 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 PYHIN1Q6K0P9 492 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 HDXQ7Z353 690 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 PPP1R27Q86WC6 154 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 Q8IYB0 196 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 STPG3Q8N7X2 389 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 OR52B4Q8NGK2 314 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 RP9Q8TA86 221 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms