RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 PPP3R1P63098 170 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 FABP5Q01469 135 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TGFBR3Q03167 851 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SCRN3Q0VDG4 424 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CDC20Q12834 499 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 EIF2B1Q14232 305 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SPCS2Q15005 226 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CDK5R1Q15078 307 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 HIST3H3Q16695 136 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF181Q2M3W8 571 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 RGS21Q2M5E4 152 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC36A2Q495M3 483 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ACSM3Q53FZ2 586 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 HSD17B12Q53GQ0 312 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MESTQ5EB52 335 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 RIPPLY2Q5TAB7 128 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 LINC01590Q5TEZ4 76 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2G6Q5TZ20 316 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM27BQ5VT28 67 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM244Q5VVB8 128 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 LIPNQ5VXI9 398 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OLFML2AQ68BL7 652 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 DMKNQ6E0U4 476 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 C22orf42Q6IC83 251 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2A2Q6IF42 318 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ARL9Q6T311 187 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 IGFL2Q6UWQ7 119 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 IGFL3Q6UXB1 125 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SSX8Q7RTT4 187 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 AAED1Q7RTV5 226 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 DPY19L4Q7Z388 723 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 FTMTQ8N4E7 242 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF525Q8N782 197 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF676Q8N7Q3 588 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ZFP62Q8NB50 900 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MDS2Q8NDY4 140 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM83FQ8NEG4 500 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 NOXO1Q8NFA2 376 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 BBS1Q8NFJ9 593 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC26A10Q8NG04 563 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR9K2Q8NGE7 335 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR52H1Q8NGJ2 320 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR51L1Q8NGJ5 315 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5D14Q8NGL3 314 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR6N2Q8NGY6 317 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR10D3Q8NH80 312 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5AK2Q8NH90 309 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 GHSRQ92847 366 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM203Q969S6 136 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MCHR2Q969V1 340 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 C10orf35Q96D05 121 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 RASD2Q96D21 266 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 PELI1Q96FA3 418 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CPNE2Q96FN4 548 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 VSIG2Q96IQ7 327 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ARL5BQ96KC2 179 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 C9orf85Q96MD7 179 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OPALINQ96PE5 141 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5M11Q96RB7 305 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR8B4Q96RC9 309 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TBX5Q99593 518 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC30A2Q9BRI3 323 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 DCUN1D5Q9BTE7 237 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 NDUFAF3Q9BU61 184 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CCDC32Q9BV29 185 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TMED9Q9BVK6 235 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 HCAR1Q9BXC0 346 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MRPL13Q9BYD1 178 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TTTY12Q9BZ98 90 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ULBP2Q9BZM5 246 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 LINC00470Q9BZP3 86 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SLIRPQ9GZT3 109 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 C6orf62Q9GZU0 229 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR51E2Q9H255 320 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TPK1Q9H3S4 243 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 RGCCQ9H4X1 137 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM185BQ9H7F4 350 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ISG20L2Q9H9L3 353 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ABRACLQ9P1F3 81 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CLEC2DQ9UHP7 191 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF391Q9UJN7 358 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 IKZF2Q9UKS7 526 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 FBXL3Q9UKT7 428 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 POLR1DQ9Y2S0 133 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TIMM10BQ9Y5J6 103 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 PCDH15Q96QU1 1955 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MYO10Q9HD67 2058 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 NUMA1Q14980 2115 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 FASNP49327 2511 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TPRP12270 2363 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 EYSQ5T1H1 3165 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 A0A0J9YW62 118 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 A0A1B0GVI7 797 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR6C6A6NF89 314 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 FABP12A6NFH5 140 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TVP23AA6NH52 213 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC22A20A6NK97 555 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 DHRS7CA6NNS2 312 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CENPXA8MT69 81 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF878C9JN71 531 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms