RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 A0A1B0GVX0 72 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 A0A1W2PQ67 120 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 DNASE2O00115 360 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 PRMT5O14744 637 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZW10O43264 779 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 GATCO43716 136 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 CTNSO60931 367 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 POP7O75817 140 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 UPK1BO75841 260 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 PROSCO94903 275 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 CDK14O94921 469 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 VAPBO95292 243 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 GYPCP04921 128 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 FAM228BP0C875 321 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 DNAH10OSP0CZ25 163 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 IGHV1-8P0DP01 117 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF7P17097 686 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 IGFBP3P17936 291 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 NELFEP18615 380 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 BGNP21810 368 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 GGT2P36268 569 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 GPR4P46093 362 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 UBE2E1P51965 193 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 C2orf54Q08AI8 447 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 PAFAH1B3Q15102 231 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 C18orf21Q32NC0 220 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 TFDP3Q5H9I0 405 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 CCDC122Q5T0U0 273 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 THOC7Q6I9Y2 204 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 SHISA6Q6ZSJ9 500 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 LINC01551Q86U37 167 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 OOSP2Q86WS3 158 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 SLC30A8Q8IWU4 369 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 SYS1Q8N2H4 156 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF786Q8N393 782 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF433Q8N7K0 673 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 C15orf56Q8N910 161 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR4E2Q8NGC2 313 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR51A7Q8NH64 312 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR5W2Q8NH69 310 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 COQ8AQ8NI60 647 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 CACNG8Q8WXS5 425 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 RERGQ96A58 199 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 IMP4Q96G21 291 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF514Q96K75 400 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 UBE2E2Q96LR5 201 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 OLFM3Q96PB7 478 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 TRIB3Q96RU7 358 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 LYSMD1Q96S90 227 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 CAMK2N2Q96S95 79 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 TSNAXQ99598 290 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 KCNS3Q9BQ31 491 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 UTP23Q9BRU9 249 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 TIMM29Q9BSF4 260 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 PRRG3Q9BZD7 231 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 SLC25A39Q9BZJ4 359 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 TOLLIPQ9H0E2 274 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 SYT4Q9H2B2 425 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 CHMP5Q9NZZ3 219 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 DHCR7Q9UBM7 475 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 CFL2Q9Y281 166 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 RBMX2Q9Y388 322 aaKnown RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 PPIL1Q9Y3C6 166 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR51B2Q9Y5P1 312 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 ARL5AQ9Y689 179 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 C2CD3Q4AC94 2353 aa2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 SETD2Q9BYW2 2564 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC11-205ENST00000506426 SCN8AQ9UQD0 1980 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 F8P00451 2351 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ITPR3Q14573 2671 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 NACAE9PAV3 2078 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 IGKV1-8A0A0C4DH67 115 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ANKRD20A5PA0PJZ0 165 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 TLCD2A6NGC4 264 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR51F1A6NGY5 319 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR5K4A6NMS3 321 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 SEC14L6B5MCN3 397 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 C21orf140B9A014 251 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 HSBP1L1C9JCN9 74 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 SLC22A5O76082 557 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 TTC4O95801 387 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PTTG1O95997 202 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 STATHP02808 62 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 CCL2P13500 99 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PGAM1P18669 254 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PRKACBP22694 351 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 KDELR1P24390 212 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 SPAM1P38567 509 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 CD151P48509 253 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PPOXP50336 477 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 HCCSP53701 268 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 RPL23P62829 140 aaKnown RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 RPL31P62899 125 aaKnown RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PPIDQ08752 370 aaKnown RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 IFFO1Q0D2I5 559 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 GPR176Q14439 515 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PIGHQ14442 188 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 DEFB116Q30KQ4 102 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 FBXW9Q5XUX1 488 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 RTL4Q6ZR62 310 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms