RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CENPNQ96H22 339 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-210ENST00000506042 NR1H4Q96RI1 486 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-210ENST00000506042 LIN7CQ9NUP9 197 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-210ENST00000506042 PAK1IP1Q9NWT1 392 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-210ENST00000506042 U3KQK5 164 aa16.65■□□□□ 0.26
SQSTM1-210ENST00000506042 CCL24O00175 119 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 CCRL2O00421 344 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 HSD17B6O14756 317 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 TXNL1O43396 289 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 RAB3AP20336 220 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 GDNFP39905 211 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 GNG10P50151 68 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 PAX5Q02548 391 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 HNF4GQ14541 408 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 PNLIPRP3Q17RR3 467 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 MOB3BQ86TA1 216 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 TGIF2LXQ8IUE1 241 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 OR8H1Q8NGG4 311 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 CNIH3Q8TBE1 160 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 C4orf36Q96KX1 117 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 FAM192AQ9GZU8 254 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 PPIL3Q9H2H8 161 aaKnown RBP16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 PSG11Q9UQ72 335 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 KIAA2026Q5HYC2 2103 aa16.64■□□□□ 0.25
SQSTM1-210ENST00000506042 A0A1W2PPI3 338 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 H0YHG0 523 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 CIB2O75838 187 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 CSTBP04080 98 aaKnown RBP16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 OR5H8P0DN80 308 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 VSIG8P0DPA2 414 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 ZNF816Q0VGE8 651 aaPredicted RBP16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 ETV3LQ6ZN32 361 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 AMIGO2Q86SJ2 522 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 SYS1Q8N2H4 156 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 OR5AK2Q8NH90 309 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 TFAP2CQ92754 450 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 Q96MT0 163 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 NOL4LQ96MY1 436 aaPredicted RBP16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 P2RX4Q99571 388 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 RASL11BQ9BPW5 248 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 LINC00574Q9H8X3 128 aa16.63■□□□□ 0.25
SQSTM1-210ENST00000506042 ATP5HO75947 161 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 FADS2O95864 444 aaKnown RBP16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 VDAC1P21796 283 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 GBX2P52951 348 aaPredicted RBP16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 LTC4SQ16873 150 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 SLC25A30Q5SVS4 291 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 LINC00596Q86U02 117 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 SATL1Q86VE3 508 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 STX19Q8N4C7 294 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 PARP16Q8N5Y8 322 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 MRGPRDQ8TDS7 321 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 TNFAIP8L1Q8WVP5 186 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 SLC7A6OSQ96CW6 309 aaPredicted RBP16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 OAZ3Q9UMX2 235 aa16.62■□□□□ 0.25
SQSTM1-210ENST00000506042 NPIPB11E5RHQ5 1161 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 ELANEP08246 267 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 NANOS3P60323 173 aaKnown RBP16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 SNRPGP62308 76 aaKnown RBP16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 FOXE3Q13461 319 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 GPR50Q13585 617 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 CDK5R1Q15078 307 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 TMEM30BQ3MIR4 351 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 IZUMO1Q8IYV9 350 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 OR52M1Q8NGK5 317 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 OR13A1Q8NGR1 328 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 PELI1Q96FA3 418 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 JAM3Q9BX67 310 aa16.61■□□□□ 0.25
SQSTM1-210ENST00000506042 TMEM30CPA0ZSE6 113 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 OR4C45A6NMZ5 311 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 CGB3P0DN86 165 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 CGB7P0DN87 165 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 CDX1P47902 265 aaPredicted RBP16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 ZP1P60852 638 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 PPP3R1P63098 170 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 GALEQ14376 348 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 OR51A4Q8NGJ6 313 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 NEK7Q8TDX7 302 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 CHCHD6Q9BRQ6 235 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 ALG8Q9BVK2 526 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 ABCG5Q9H222 651 aa16.6■□□□□ 0.25
SQSTM1-210ENST00000506042 IGHV1-3A0A0C4DH29 117 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 C3orf84H3BNL1 204 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 ZNF780AO75290 641 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 INSL3P51460 131 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 EBI3Q14213 229 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 KIR2DS1Q14954 304 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 Q3ZCU0 254 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 RFESDQ8TAC1 157 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 LEAP2Q969E1 77 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 DPCDQ9BVM2 203 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 METTL9Q9H1A3 318 aa16.59■□□□□ 0.25
SQSTM1-210ENST00000506042 SDCBPO00560 298 aaPredicted RBP16.58■□□□□ 0.24
SQSTM1-210ENST00000506042 OR7C1O76099 320 aaPredicted RBP16.58■□□□□ 0.24
SQSTM1-210ENST00000506042 HTR3BO95264 441 aa16.58■□□□□ 0.24
SQSTM1-210ENST00000506042 MOSP00540 346 aa16.58■□□□□ 0.24
SQSTM1-210ENST00000506042 IGHV3-7P01780 117 aa16.58■□□□□ 0.24
SQSTM1-210ENST00000506042 CD1BP29016 333 aa16.58■□□□□ 0.24
SQSTM1-210ENST00000506042 POLR2IP36954 125 aaKnown RBP16.58■□□□□ 0.24
SQSTM1-210ENST00000506042 GPR12P47775 334 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms