RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 SH2D2AQ9NP31 389 aa10.2□□□□□ -0.78
UBE3D-206ENST00000505226 TCFL5Q9UL49 500 aa10.2□□□□□ -0.78
UBE3D-206ENST00000505226 IGHV1-45A0A0A0MS14 117 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 CLEC18AA5D8T8 446 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 ZNF716A6NP11 495 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 RPL36A-HNRNPH2H7BZ11 118 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 RPL23AP62750 156 aaKnown RBP10.19□□□□□ -0.78
UBE3D-206ENST00000505226 RAC1P63000 192 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 VAMP2P63027 116 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 KHDC3LQ587J8 217 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 UNQ6494/PRO21346Q6UXR6 183 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 YRDCQ86U90 279 aaKnown RBP10.19□□□□□ -0.78
UBE3D-206ENST00000505226 HIST3H2BBQ8N257 126 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 CLEC18CQ8NCF0 446 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 DNASE2BQ8WZ79 361 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 FRZBQ92765 325 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 IMMP1LQ96LU5 166 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 SLC25A31Q9H0C2 315 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 Q9N2K0 584 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 C19orf25Q9UFG5 118 aaPredicted RBP10.19□□□□□ -0.78
UBE3D-206ENST00000505226 BTBD17A6NE02 478 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 ZFP36L1Q07352 338 aaKnown RBP10.19□□□□□ -0.78
UBE3D-206ENST00000505226 FAM90A2PQ658T7 463 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 CMTM1Q8IZ96 169 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 C17orf78Q8N4C9 275 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 CPNE4Q96A23 557 aaPredicted RBP10.19□□□□□ -0.78
UBE3D-206ENST00000505226 SSX3Q99909 188 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
UBE3D-206ENST00000505226 PHOX2AO14813 284 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 HSPA12AO43301 675 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 NAPSAO96009 420 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 CEACAM1P13688 526 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 UCP1P25874 307 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 MPV17LQ2QL34 196 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 CEACAM16Q2WEN9 425 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 C20orf204Q6ZNR8 217 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 UNKLQ9H9P5 680 aaKnown RBP10.18□□□□□ -0.78
UBE3D-206ENST00000505226 PTRH2Q9Y3E5 179 aaKnown RBP10.18□□□□□ -0.78
UBE3D-206ENST00000505226 KIAA1324LA8MWY0 1029 aaPredicted RBP10.18□□□□□ -0.78
UBE3D-206ENST00000505226 WRBO00258 174 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 IGHV3-9P01782 118 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 TRGC1P0CF51 173 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 COX6A1P12074 109 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 S100A2P29034 98 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 CLDN15P56746 228 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 SRPXP78539 464 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 ZNF726P1Q15940 193 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 C4orf17Q53FE4 359 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 AKR1C8PQ5T2L2 129 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 GGNQ86UU5 652 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 THNSL2Q86YJ6 484 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 FAM185AQ8N0U4 392 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 FOXB1Q99853 325 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 PCED1AQ9H1Q7 454 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 GNG13Q9P2W3 67 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 MUC3AQ02505 3323 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 FREM1Q5H8C1 2179 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 LOC102723996A0A087X1L8 192 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 ZNF816-ZNF321PA0A0X1KG74 233 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 LOC102723971A0A1B0GUV8 181 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 SEC14L6B5MCN3 397 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 TUSC2O75896 110 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 HLA-HP01893 362 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 RFPL3SP0C7P2 107 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 VDAC1P21796 283 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 TAS2R30P59541 319 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 TMEM267Q0VDI3 215 aaPredicted RBP10.18□□□□□ -0.78
UBE3D-206ENST00000505226 Q6ZRM9 215 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 SLC35E3Q7Z769 313 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 GNPNAT1Q96EK6 184 aaPredicted RBP10.18□□□□□ -0.78
UBE3D-206ENST00000505226 ATP5SQ99766 215 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 RSG1Q9BU20 258 aa10.18□□□□□ -0.78
UBE3D-206ENST00000505226 CXorf65A6NEN9 183 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 MDKP21741 143 aaPredicted RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 RAC3P60763 192 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 RPS18P62269 152 aaKnown RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 HLA-DRB3P79483 266 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 CPT1CQ8TCG5 803 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 HIPK2Q9H2X6 1198 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 ZNF665Q9H7R5 613 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 RPRMQ9NS64 109 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 NOSIPQ9Y314 301 aaKnown RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 CHD3Q12873 2000 aaKnown RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 YKT6O15498 198 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 PGLYRP1O75594 196 aaPredicted RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 KLF7O75840 302 aaPredicted RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 TK1P04183 234 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 CCL2P13500 99 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 ARL16Q0P5N6 197 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 GAMTQ14353 236 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 AAED1Q7RTV5 226 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 Q8NFD4 153 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 C14orf144Q96I85 54 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 SPIN2AQ99865 258 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 SPIN2BQ9BPZ2 258 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 SIRT7Q9NRC8 400 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 MTCH1Q9NZJ7 389 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 PI4KAP42356 2102 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 CXCL13O43927 109 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms