RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TINAGQ9UJW2 476 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 MBD3L4A6NDZ8 208 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-204ENST00000503492 MBD3L3A6NE82 208 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-204ENST00000503492 MBD3L5A6NJ08 208 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-204ENST00000503492 K7EPK0 472 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 SIRPB1O00241 398 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 OR2H2O95918 312 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 HLA-DRB3P79483 266 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 TUSC1Q2TAM9 212 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 Q6ZS92 163 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 FAM71E2Q8N5Q1 922 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 MBD3L2Q8NHZ7 208 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-204ENST00000503492 USB1Q9BQ65 265 aaKnown RBP19.07■□□□□ 0.64
PCDH1-204ENST00000503492 TMEM222Q9H0R3 208 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 ZC4H2Q9NQZ6 224 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 CCL28Q9NRJ3 127 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 NUP50Q9UKX7 468 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 SVILO95425 2214 aa19.07■□□□□ 0.64
PCDH1-204ENST00000503492 SLC33A1O00400 549 aaPredicted RBP19.06■□□□□ 0.64
PCDH1-204ENST00000503492 TMEM268Q5VZI3 342 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 OR4A4PQ8NGN8 299 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 PLPPR1Q8TBJ4 325 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 PURGQ9UJV8 347 aaKnown RBP19.06■□□□□ 0.64
PCDH1-204ENST00000503492 KRBOX1C9JBD0 128 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 HSD17B6O14756 317 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 MLNRO43193 412 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 RPL7L1Q6DKI1 246 aaKnown RBP19.06■□□□□ 0.64
PCDH1-204ENST00000503492 GALNT11Q8NCW6 608 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 OR8G5Q8NG78 346 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 OBP2BQ9NPH6 170 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 TMEM100Q9NV29 134 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 PCDHB10Q9UN67 800 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 TMA7Q9Y2S6 64 aaKnown RBP19.06■□□□□ 0.64
PCDH1-204ENST00000503492 AMDHD2Q9Y303 409 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 TMED3Q9Y3Q3 217 aa19.06■□□□□ 0.64
PCDH1-204ENST00000503492 K7EM74 188 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 KLK10O43240 276 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 NXPH2O95156 264 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 IGLV1-44P01699 117 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 ZNF324BQ6AW86 544 aaPredicted RBP19.05■□□□□ 0.64
PCDH1-204ENST00000503492 TRAV39A0A0B4J263 110 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 TMEM210A6NLX4 147 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 TAAR5O14804 337 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 OR1S2Q8NGQ3 325 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 CABLES2Q9BTV7 478 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 TAS2R3Q9NYW6 316 aa19.05■□□□□ 0.64
PCDH1-204ENST00000503492 UBE2J1Q9Y385 318 aaPredicted RBP19.05■□□□□ 0.64
PCDH1-204ENST00000503492 ZFHX2Q9C0A1 2572 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-204ENST00000503492 ZNF146Q15072 292 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 STPG2Q8N412 459 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 KIRREL1Q96J84 757 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 TMEM56Q96MV1 263 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 TREM2Q9NZC2 230 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 TMEM56-RWDD3S4R434 201 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 IGHV1-18A0A0C4DH31 117 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 FAM157CP0CG43 387 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 MDH2P40926 338 aaKnown RBP19.04■□□□□ 0.64
PCDH1-204ENST00000503492 SRPXP78539 464 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 ZNF497Q6ZNH5 498 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 BHLHA15Q7RTS1 189 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-204ENST00000503492 H1FOOQ8IZA3 346 aaPredicted RBP19.04■□□□□ 0.64
PCDH1-204ENST00000503492 ASF1BQ9NVP2 202 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 FBXL17Q9UF56 701 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 FZR1Q9UM11 496 aa19.04■□□□□ 0.64
PCDH1-204ENST00000503492 E5RGE8 158 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 P2RY6Q15077 328 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 C11orf53Q8IXP5 236 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 RBMXL3Q8N7X1 1067 aaKnown RBP19.03■□□□□ 0.64
PCDH1-204ENST00000503492 SPERTQ8NA61 448 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 OR4D5Q8NGN0 318 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 OR10J5Q8NHC4 309 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 RNF141Q8WVD5 230 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 PLEKHA2Q9HB19 425 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 NSG2Q9Y328 171 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 OR5H1A6NKK0 313 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 EIF2S3P41091 472 aaKnown RBP19.03■□□□□ 0.64
PCDH1-204ENST00000503492 TMEM33P57088 247 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 SELENOHQ8IZQ5 122 aaKnown RBP19.03■□□□□ 0.64
PCDH1-204ENST00000503492 BOLLQ8N9W6 283 aaKnown RBP19.03■□□□□ 0.64
PCDH1-204ENST00000503492 OR2W1Q9Y3N9 320 aa19.03■□□□□ 0.64
PCDH1-204ENST00000503492 IGHV2OR16-5A0A0B4J2B6 119 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 NKX2-6A6NCS4 301 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 ZSCAN5BA6NJL1 495 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 SH2D1BO14796 132 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 SHEQ5VZ18 495 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 Q6ZR03 302 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 ZNF826PQ6ZT77 177 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 ZNF695Q8IW36 515 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 RPRMLQ8N4K4 120 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 LILRB1Q8NHL6 650 aaPredicted RBP19.02■□□□□ 0.64
PCDH1-204ENST00000503492 LUZP4Q9P127 313 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 OR1A1Q9P1Q5 309 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 ZDHHC8Q9ULC8 765 aa19.02■□□□□ 0.64
PCDH1-204ENST00000503492 KITLGP21583 273 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 FABP6P51161 128 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 BEND4Q6ZU67 534 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 IL1F10Q8WWZ1 152 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 ERGIC1Q969X5 290 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 BCL2L14Q9BZR8 327 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 TAF9BQ9HBM6 251 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms