RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PAQR4Q8N4S7 273 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR52B4Q8NGK2 314 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF480Q8WV37 535 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR1E3Q8WZA6 343 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 IL22RA2Q969J5 263 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RHOVQ96L33 236 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RAB40CQ96S21 281 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SPSB2Q99619 263 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PDCD1LG2Q9BQ51 273 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 AGMATQ9BSE5 352 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 CBLN4Q9NTU7 201 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MRPL15Q9P015 296 aaKnown RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 IL36AQ9UHA7 158 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 NAT8BQ9UHF3 227 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SIRT4Q9Y6E7 314 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 DNAH3Q8TD57 4116 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 STAB2Q8WWQ8 2551 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 NDUFS4O43181 175 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SLC2A10O95528 541 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 C8AP07357 584 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 CTXN2P0C2S0 81 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 AMY2BP19961 511 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 UCP3P55916 312 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 GFRA1P56159 465 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SLC37A1P57057 533 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ERVK11-1P61568 191 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PPP1CBP62140 327 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MEF2BQ02080 365 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 C2orf76Q3KRA6 126 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 BEX5Q5H9J7 111 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 CLEC2AQ6UVW9 174 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 LSRQ86X29 649 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 FBXL14Q8N1E6 418 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ZFP62Q8NB50 900 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 STXBP6Q8NFX7 210 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR10G8Q8NGN5 311 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR2G3Q8NGZ4 309 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 C16orf52Q8NHV5 167 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RHBDD1Q8TEB9 315 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 AMDHD1Q96NU7 426 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PMCHL2Q9BQD1 86 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PRSS50Q9UI38 385 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MSRAQ9UJ68 235 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MYO9BQ13459 2157 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 USF3Q68DE3 2245 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 C5orf42Q9H799 3197 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MUC3AQ02505 3323 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 HAX1O00165 279 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 APOHP02749 345 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF708P17019 499 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF43P17038 809 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 GABRA3P34903 492 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 LSSP48449 732 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 CEBPDP49716 269 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PSMB3P49720 205 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 TMPRSS3P57727 454 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RAB38P57729 211 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 FOXL1Q12952 345 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 EIF2B1Q14232 305 aaKnown RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MORN2Q502X0 79 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RHBDD2Q6NTF9 364 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MFSD12Q6NUT3 480 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM156Q8N614 296 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR5AK3PQ8NH89 298 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PLPPR1Q8TBJ4 325 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 Q8WTZ3 238 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SLAMF6Q96DU3 332 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RNF126Q9BV68 326 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 COL25A1Q9BXS0 654 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF703Q9H7S9 590 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PATZ1Q9HBE1 687 aaKnown RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 AK3Q9UIJ7 227 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 VDAC3Q9Y277 283 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 VSIG4Q9Y279 399 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MYO7AQ13402 2215 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 APC2O95996 2303 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 A0A1W2PPC4 97 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 A0A1W2PRS3 328 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 NUDT3O95989 172 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SOD3P08294 240 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PGA4P0DJD7 388 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PGA5P0DJD9 388 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ACRP10323 421 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 LIPCP11150 499 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 HIST1H1TP22492 207 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 EMDP50402 254 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ATP5IP56385 69 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 YPEL3P61236 119 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 TBPL1P62380 186 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 TSTA3Q13630 321 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ABCA11PQ4W5N1 156 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF385BQ569K4 471 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OCIAD2Q56VL3 154 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 VASH2Q86V25 355 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 CPEB3Q8NE35 698 aaKnown RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR5A1Q8NGJ0 315 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR51A4Q8NGJ6 313 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR5D14Q8NGL3 314 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 CMTM2Q8TAZ6 248 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 APH1AQ96BI3 265 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms