RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ODAMA1E959 279 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 MEX3AA1L020 520 aaKnown RBP16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 MEIS3P1A6NDR6 274 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 H7C1Q1 480 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 HEXAP06865 529 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 MRPS10P82664 201 aaKnown RBP16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 Q6ZPA2 131 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 TRAPPC6BQ86SZ2 158 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 GPX8Q8TED1 209 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 FCAMRQ8WWV6 532 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 SRRQ9GZT4 340 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 SCPEP1Q9HB40 452 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 ZNF230Q9UIE0 474 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 TRAPPC2LQ9UL33 140 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 KIAA2026Q5HYC2 2103 aa16.88■□□□□ 0.29
CDC42SE2-206ENST00000503291 TRAV39A0A0B4J263 110 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 GABARAPH6UMI1 98 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 SULT1C2O00338 296 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 LPLP06858 475 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 RPL31P62899 125 aaKnown RBP16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 DGCR2P98153 550 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 DCTN5Q9BTE1 182 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 C19orf12Q9NSK7 152 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 FCGR3AP08637 254 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 RCC1P18754 421 aaPredicted RBP16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 ZFP36P26651 326 aaKnown RBP16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 Q8N402 240 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 SETD6Q8TBK2 473 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 SMIM4Q8WVI0 70 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 OCSTAMPQ9BR26 566 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 ST6GALNAC5Q9BVH7 336 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 NCOR1P1Q9H4R4 102 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 KLK11Q9UBX7 282 aa16.87■□□□□ 0.29
CDC42SE2-206ENST00000503291 TRBV6-6A0A0A6YYG2 114 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 FAM157AC9JC47 383 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 DTYMKP23919 212 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 LOXL1Q08397 574 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 ZNF846Q147U1 533 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 GVQW1Q8N7I0 195 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 ZNF565Q8N9K5 539 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 SDHCQ99643 169 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 WDR12Q9GZL7 423 aaKnown RBP16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 KIAA1324LA8MWY0 1029 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 FCER2P06734 321 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 MEF2CQ06413 473 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 TMEM200BQ69YZ2 307 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 GDPD1Q8N9F7 314 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 OR13A1Q8NGR1 328 aa16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 MBNL3Q9NUK0 354 aaKnown RBP16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 RPUSD1Q9UJJ7 312 aaKnown RBP16.86■□□□□ 0.29
CDC42SE2-206ENST00000503291 ARHGAP32A7KAX9 2087 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 DSCAML1Q8TD84 2053 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 TRBV23-1A0A0A0MS06 115 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 GSTZ1O43708 216 aaPredicted RBP16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 ECDO95905 644 aaPredicted RBP16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 PPP5CP53041 499 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 LCN2P80188 198 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 ZNF880Q6PDB4 577 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 MAPK1IP1LQ8NDC0 245 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 MRGPRDQ8TDS7 321 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 MAFIPQ8WZ33 124 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 THAP7Q9BT49 309 aaPredicted RBP16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 Q9N2K0 584 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 OR6C3Q9NZP0 311 aa16.85■□□□□ 0.29
CDC42SE2-206ENST00000503291 SETXQ7Z333 2677 aaKnown RBP16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 LOC105371242A0A075B767 164 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 hADV38S2A0JD32 116 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 A8MXK9 166 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 C22orf46C9J442 243 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 RBBP9O75884 186 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 CBX5P45973 191 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 C11orf91Q3C1V1 193 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 CD276Q5ZPR3 534 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 TCF23Q7RTU1 214 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 FAM185AQ8N0U4 392 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 MTFP1Q9UDX5 166 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 TRGV10A0A0A0MS01 117 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 POM121CA8CG34 1229 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 FOXH1O75593 365 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 CD40LGP29965 261 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 GLP1RP43220 463 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 BAK1Q16611 211 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 CR1LQ2VPA4 569 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 CORO2AQ92828 525 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 IFT46Q9NQC8 304 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 LINC00312Q9Y6C7 94 aa16.84■□□□□ 0.29
CDC42SE2-206ENST00000503291 J3QRK9 145 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 LANCL1O43813 399 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 ORC5O43913 435 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 GZMHP20718 246 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 ZNF273Q14593 569 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 C5orf24Q7Z6I8 188 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 HOGA1Q86XE5 327 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 C8orf46Q8TAG6 207 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 LPAR2Q9HBW0 351 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 LPAR3Q9UBY5 353 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 RBMX2Q9Y388 322 aaKnown RBP16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 ITPR3Q14573 2671 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 MYO9AB2RTY4 2548 aa16.83■□□□□ 0.28
CDC42SE2-206ENST00000503291 IGKV1D-8A0A087WSZ0 117 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms