RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 GPR148Q8TDV2 347 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 TMEM106AQ96A25 262 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 R3HDM4Q96D70 268 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 SLC25A33Q9BSK2 321 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 CALYQ9NYX4 217 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 OR6C3Q9NZP0 311 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 ING4Q9UNL4 249 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 PEX14O75381 377 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 LPLP06858 475 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 DCKP27707 260 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 DOC2BQ14184 412 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 RSU1Q15404 277 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 CCDC58Q4VC31 144 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 ABCA11PQ4W5N1 156 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
SCLT1-204ENST00000503215 FAM53AQ6NSI3 398 aaPredicted RBP12.96□□□□□ -0.33
SCLT1-204ENST00000503215 OR5AU1Q8NGC0 362 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 MRGPRDQ8TDS7 321 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 CYGBQ8WWM9 190 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 BABAM2Q9NXR7 383 aa12.96□□□□□ -0.33
SCLT1-204ENST00000503215 A0A1W2PP11 408 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 MAGEB3O15480 346 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 BRS3P32247 399 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 SSTR5P35346 364 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 PRRX1P54821 245 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 RPS11P62280 158 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCLT1-204ENST00000503215 CD83Q01151 205 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 EMX1Q04741 257 aaPredicted RBP12.95□□□□□ -0.34
SCLT1-204ENST00000503215 DCTN2Q13561 401 aaKnown RBP12.95□□□□□ -0.34
SCLT1-204ENST00000503215 IL13RA2Q14627 380 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 TMPRSS11AQ6ZMR5 421 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 ZNF485Q8NCK3 441 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 GHSRQ92847 366 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 CYYR1Q96J86 154 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 RDH12Q96NR8 316 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 RBM14Q96PK6 669 aaKnown RBP12.95□□□□□ -0.34
SCLT1-204ENST00000503215 LINC00574Q9H8X3 128 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 LIN7BQ9HAP6 207 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 IDI2-AS1Q9NZ38 188 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 DIMT1Q9UNQ2 313 aaKnown RBP12.95□□□□□ -0.34
SCLT1-204ENST00000503215 PSG11Q9UQ72 335 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 ZNF281Q9Y2X9 895 aa12.95□□□□□ -0.34
SCLT1-204ENST00000503215 TRAV8-7A0A075B6U6 113 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 A0A1B0GVG6 124 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 A0A1W2PPE3 182 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 NPIPB11E5RHQ5 1161 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 J3QR06 171 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 GEMIN2O14893 280 aaKnown RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 PFDN1O60925 122 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 OR2F2O95006 317 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 ALDOBP05062 364 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 ADARB1P78563 741 aaKnown RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 DDI2Q5TDH0 399 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 DMKNQ6E0U4 476 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 ZNF565Q8N9K5 539 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 OR9G1Q8NH87 305 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 UBALD1Q8TB05 177 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 CAPSLQ8WWF8 208 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 GGHQ92820 318 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 DPCDQ9BVM2 203 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 TMEM138Q9NPI0 162 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 ST3GAL6Q9Y274 331 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 TRBV5-5A0A0J9YX44 114 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 A0A1W2PPK0 400 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 ZNF701M0R085 212 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 IL1AP01583 271 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 CD2P06729 351 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 GNAO1P09471 354 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 IGFBP3P17936 291 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 SERPINA2P20848 420 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 ZNF93P35789 620 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 CEACAM3P40198 252 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 GNG10P50151 68 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 RBM11P57052 281 aaKnown RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 C16orf82Q7Z2V1 217 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 CENPVQ7Z7K6 275 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 DRAM1Q8N682 238 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 OR52N1Q8NH53 320 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 OR56B4Q8NH76 319 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 HAVCR2Q8TDQ0 301 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 SMIM19Q96E16 107 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 RBM38Q9H0Z9 239 aaKnown RBP12.94□□□□□ -0.34
SCLT1-204ENST00000503215 METTL9Q9H1A3 318 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 NCOR1P1Q9H4R4 102 aa12.94□□□□□ -0.34
SCLT1-204ENST00000503215 A0A1W2PPI3 338 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A18PA6NE21 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A16PA6NEW6 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A20PA6NIJ5 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A12PA8MX19 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A5PA8MXJ8 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A15PP0C7V4 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A13PP0C7W8 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A14PP0C7W9 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 FAM90A24PP0C7X0 464 aa12.93□□□□□ -0.34
SCLT1-204ENST00000503215 C21orf33P30042 268 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms