RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SOCS1O15524 211 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 ANGPTL7O43827 346 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 NOS1APO75052 506 aaPredicted RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 RAB3DO95716 219 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 TCRBP04435 133 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 IFNA6P05013 189 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 PTHLHP12272 177 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 HIST1H1DP16402 221 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 GNB3P16520 340 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 GABRR1P24046 479 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 GIFP27352 417 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 CHRNB4P30926 498 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 PMELP40967 661 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 OR3A3P47888 321 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 FABP6P51161 128 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 IL24Q13007 206 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 MAB21L1Q13394 359 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 MEF2DQ14814 521 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 CARTPTQ16568 116 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 PLA1AQ53H76 456 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 ACTBL2Q562R1 376 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 SFRP4Q6FHJ7 346 aaPredicted RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 ELP2Q6IA86 826 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 STEAP1BQ6NZ63 245 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 MTFR2Q6P444 385 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM108Q6UXF1 575 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 MEX3BQ6ZN04 569 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 SLC25A26Q70HW3 274 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 BTN2A1Q7KYR7 527 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 TRAPPC6BQ86SZ2 158 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 LINC00596Q86U02 117 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 MYPOPQ86VE0 399 aaPredicted RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 CALHM1Q8IU99 346 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 IQCF2Q8IXL9 164 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 Q8IYB0 196 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 RELL2Q8NC24 303 aaPredicted RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 Q8NFD4 153 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 OR10K1Q8NGX5 313 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 ARHGAP5-AS1Q96IT6 56 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 RADILQ96JH8 1075 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 HYLS1Q96M11 299 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 NICN1Q9BSH3 213 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 MARVELD1Q9BSK0 173 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 ADAT1Q9BUB4 502 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 PECRQ9BY49 303 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 ZMAT3Q9HA38 289 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 PLEKHJ1Q9NW61 149 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 MCUBQ9NWR8 336 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 NDRG3Q9UGV2 375 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 SCP2D1Q9UJQ7 156 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 HSF4Q9ULV5 492 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 ST3GAL6Q9Y274 331 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 PLEKHA6Q9Y2H5 1048 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 KMT2CQ8NEZ4 4911 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 A0A0A6YYD4 124 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 PLSCR5A0PG75 271 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 LINC00862A6NCI5 91 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 MEIS3P1A6NDR6 274 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 TUBAL3A6NHL2 446 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 FOXI3A8MTJ6 420 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF736B4DX44 427 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 J3QT63 122 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 MFNGO00587 321 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 BET1O15155 118 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 SSX4O60224 188 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 PRAF2O60831 178 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 IGHV3-13P01766 116 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 MT-ND4P03905 459 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 CD3DP04234 171 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 GLAP06280 429 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 GRPP07492 148 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 SFTPBP07988 381 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 ACAA1P09110 424 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF250P15622 560 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 PRKACAP17612 351 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 TBPP20226 339 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 FUT3P21217 361 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 MPZP25189 248 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 CD40P25942 277 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 CALCRP30988 508 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 MPV17P39210 176 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 HTR2BP41595 481 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 CCR6P51684 374 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 RBM11P57052 281 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 KLF3P57682 345 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 FGF12P61328 243 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 ERVS71-1P61550 626 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 BAMBIQ13145 260 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 RBM39Q14498 530 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 ZMYND11Q15326 602 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 RBMS2Q15434 407 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 TAF9Q16594 264 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 MPV17LQ2QL34 196 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 FBXL19-AS1Q494R0 122 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 RNASE10Q5GAN6 216 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM76BQ5HYJ3 339 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 NHLRC3Q5JS37 347 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 HAGHLQ6PII5 290 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 FIP1L1Q6UN15 594 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 SLC51BQ86UW2 128 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms