RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PPIAL4CA0A0B4J2A2 164 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 hADV38S2A0JD32 116 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 GPR37O15354 613 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 XRCC3O43542 346 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 ECDO95905 644 aaPredicted RBP11.21□□□□□ -0.61
CPNE1-227ENST00000498056 GLAP06280 429 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 GSTP1P09211 210 aaKnown RBP11.21□□□□□ -0.61
CPNE1-227ENST00000498056 PPIAL4GP0DN37 164 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 PTHLHP12272 177 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 IL18Q14116 193 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 ZNF260Q3ZCT1 412 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 CDNFQ49AH0 187 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 RNASE12Q5GAN4 147 aaKnown RBP11.21□□□□□ -0.61
CPNE1-227ENST00000498056 BTNL3Q6UXE8 466 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 SPNS3Q6ZMD2 512 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 ZNF497Q6ZNH5 498 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 TCF23Q7RTU1 214 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 CCDC107Q8WV48 283 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 MSI2Q96DH6 328 aaKnown RBP11.21□□□□□ -0.61
CPNE1-227ENST00000498056 KCNK7Q9Y2U2 307 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 CELSR1Q9NYQ6 3014 aa11.21□□□□□ -0.62
CPNE1-227ENST00000498056 CA11O75493 328 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 TGFAP01135 160 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 LIPFP07098 398 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 CCL3L1P16619 93 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 ERP29P30040 261 aaKnown RBP11.2□□□□□ -0.62
CPNE1-227ENST00000498056 DCAF12L2Q5VW00 463 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 SLC35E4Q6ICL7 350 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 PRR18Q8N4B5 295 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 OR13A1Q8NGR1 328 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 C8orf46Q8TAG6 207 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 MRPL30Q8TCC3 161 aaKnown RBP11.2□□□□□ -0.62
CPNE1-227ENST00000498056 MRGPRDQ8TDS7 321 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 TMEM186Q96B77 213 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 C18orf12Q96KH6 178 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPNE1-227ENST00000498056 HIF1ANQ9NWT6 349 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 OR6C3Q9NZP0 311 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 LINC00312Q9Y6C7 94 aa11.2□□□□□ -0.62
CPNE1-227ENST00000498056 TRAV20A0A0B4J274 112 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 A0A0G2JMP0 313 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 A0A0X1KG70 313 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 A0A1W2PPH5 198 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 MEIS3P1A6NDR6 274 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 FCGR3AP08637 254 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 INHBBP09529 407 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 TNFSF8P32971 234 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 SSTR5P35346 364 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 DVL1P1P54792 670 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-227ENST00000498056 PAX5Q02548 391 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 GUCA2AQ02747 115 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-227ENST00000498056 PNLIPRP3Q17RR3 467 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 HACD4Q5VWC8 232 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 CYB5R2Q6BCY4 276 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 FAM131AQ6UXB0 335 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 MOB1BQ7L9L4 216 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 OR4M2Q8NGB6 313 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 OR6Q1Q8NGQ2 317 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 UBALD1Q8TB05 177 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 MAFIPQ8WZ33 124 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 C1orf159Q96HA4 380 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 GAL3ST2Q9H3Q3 398 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 AUNIPQ9H7T9 357 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 MMP26Q9NRE1 261 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 ACANP16112 2415 aa11.19□□□□□ -0.62
CPNE1-227ENST00000498056 NAPSAO96009 420 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 MT-ND4P03905 459 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 HLA-DRB3P79483 266 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 LTC4SQ16873 150 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 SPANXN2Q5MJ10 180 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 PRAMEF5Q5TYX0 476 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 METTL11BQ5VVY1 283 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 TMEM200BQ69YZ2 307 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 IFT46Q9NQC8 304 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-227ENST00000498056 UBE2J1Q9Y385 318 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-227ENST00000498056 ZANQ9Y493 2812 aa11.18□□□□□ -0.62
CPNE1-227ENST00000498056 FABP12A6NFH5 140 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 ZNF729A6NN14 1252 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-227ENST00000498056 SSX5O60225 188 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 FCER2P06734 321 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 CD99P14209 185 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 RCC1P18754 421 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-227ENST00000498056 ARF6P62330 175 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 PITPNAQ00169 270 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 TRAT1Q6PIZ9 186 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 ZNF782Q6ZMW2 699 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-227ENST00000498056 Q6ZPA2 131 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 GAPTQ8N292 157 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 LY6G5BQ8NDX9 201 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 DACT3Q96B18 629 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-227ENST00000498056 PCGF1Q9BSM1 259 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 RIMS4Q9H426 269 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-227ENST00000498056 CALYQ9NYX4 217 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms