RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 MED13LQ71F56 2210 aa17.97■□□□□ 0.47
C9orf3-222ENST00000496567 TRGV10A0A0A0MS01 117 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 KIR2DS1A0A191URI9 304 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 MT-ND4P03905 459 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 CD3GP09693 182 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 FOSL1P15407 271 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 GATA3P23771 443 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 MNDAP41218 407 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 PAX2Q02962 417 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 ZNF565Q8N9K5 539 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 DYRK2Q92630 601 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 CMSS1Q9BQ75 279 aaKnown RBP17.96■□□□□ 0.47
C9orf3-222ENST00000496567 EXTL2Q9UBQ6 330 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 ABCA2Q9BZC7 2435 aa17.96■□□□□ 0.47
C9orf3-222ENST00000496567 DVL1P1P54792 670 aaPredicted RBP17.96■□□□□ 0.46
C9orf3-222ENST00000496567 ARFRP1Q13795 201 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 PNLIPRP3Q17RR3 467 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 TMEM200BQ69YZ2 307 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 DACT3Q96B18 629 aaPredicted RBP17.96■□□□□ 0.46
C9orf3-222ENST00000496567 DIRAS2Q96HU8 199 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 WDFY2Q96P53 400 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 C12orf4Q9NQ89 552 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 MMP26Q9NRE1 261 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 HIF1ANQ9NWT6 349 aa17.96■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF469Q96JG9 3925 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-222ENST00000496567 POM121CA8CG34 1229 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 TAS2R20P59543 309 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 PITPNAQ00169 270 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 HACD4Q5VWC8 232 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 OLFML2AQ68BL7 652 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 TRAPPC6BQ86SZ2 158 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 IZUMO1Q8IYV9 350 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 OR6Q1Q8NGQ2 317 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 CORO2AQ92828 525 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 CYYR1Q96J86 154 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 AUNIPQ9H7T9 357 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 CHMP1AQ9HD42 196 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-222ENST00000496567 TRAPPC2LQ9UL33 140 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 UBE2J1Q9Y385 318 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-222ENST00000496567 INSIG2Q9Y5U4 225 aa17.95■□□□□ 0.46
C9orf3-222ENST00000496567 A0A0G2JMP0 313 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 A0A0X1KG70 313 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 TMEM235A6NFC5 223 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 TPPPO94811 219 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 NAPSAO96009 420 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 MELTFP08582 738 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF16P17020 682 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-222ENST00000496567 DCAF12L2Q5VW00 463 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 CNIH2Q6PI25 160 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 DTX3Q8N9I9 347 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 OR4M2Q8NGB6 313 aa17.94■□□□□ 0.46
C9orf3-222ENST00000496567 MRPL30Q8TCC3 161 aaKnown RBP17.94■□□□□ 0.46
C9orf3-222ENST00000496567 MRPS7Q9Y2R9 242 aaKnown RBP17.94■□□□□ 0.46
C9orf3-222ENST00000496567 GZMHP20718 246 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 TNFSF8P32971 234 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 GLP1RP43220 463 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 GNG2P59768 71 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF273Q14593 569 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 BAIAP2L2Q6UXY1 529 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 OR4K15Q8NH41 348 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 C15orf40Q8WUR7 153 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 CCDC107Q8WV48 283 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF714Q96N38 554 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 TAS2R3Q9NYW6 316 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 RABL2AQ9UBK7 228 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-222ENST00000496567 RABL2BQ9UNT1 228 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 ARHGAP32A7KAX9 2087 aa17.93■□□□□ 0.46
C9orf3-222ENST00000496567 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.93■□□□□ 0.462e-10■■□□□ 12.8
C9orf3-222ENST00000496567 TRBV6-6A0A0A6YYG2 114 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 CD5LO43866 347 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 CR1LQ2VPA4 569 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 C6orf183Q5T699 404 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 TRAT1Q6PIZ9 186 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 MOB1BQ7L9L4 216 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 KIR3DL3Q8N743 410 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 OR13A1Q8NGR1 328 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 GAL3ST2Q9H3Q3 398 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 ONECUT1Q9UBC0 465 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 DSCAML1Q8TD84 2053 aa17.92■□□□□ 0.46
C9orf3-222ENST00000496567 hCG_1809904A0A1W2PP81 198 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 A0A1W2PPE2 198 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 A0A1W2PR64 198 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 A0A1W2PRV1 198 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF728P0DKX0 622 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 TCF23Q7RTU1 214 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 MRGPRDQ8TDS7 321 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 HDHD3Q9BSH5 251 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-222ENST00000496567 MBNL3Q9NUK0 354 aaKnown RBP17.91■□□□□ 0.46
C9orf3-222ENST00000496567 KCNIP1Q9NZI2 227 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 OPN4Q9UHM6 478 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 ELF5Q9UKW6 265 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-222ENST00000496567 MGAT4AQ9UM21 535 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 KPTNQ9Y664 436 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 MEX3AA1L020 520 aaKnown RBP17.91■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF729A6NN14 1252 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-222ENST00000496567 J3QLI3 93 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 M0R1W7 72 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 HLA-DQB1P01920 261 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 ARF6P62330 175 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 PAX8Q06710 450 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms