RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 VASH2Q86V25 355 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 C17orf78Q8N4C9 275 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 FDCSPQ8NFU4 85 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 ABHD14BQ96IU4 210 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 TRIB1Q96RU8 372 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 SEC11CQ9BY50 192 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 UQCC1Q9NVA1 299 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 DLL3Q9NYJ7 618 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 TREM2Q9NZC2 230 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 NKX2-6A6NCS4 301 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 NUPL2O15504 423 aaKnown RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 CNOT4O95628 575 aaKnown RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 HOXB1P14653 301 aaPredicted RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 SELEP16581 610 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 VDAC1P21796 283 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 HOXC12P31275 282 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 IDH3GP51553 393 aaPredicted RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 FAM76BQ5HYJ3 339 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 C10orf91Q5T1B1 145 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF880Q6PDB4 577 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 INO80CQ6PI98 192 aaPredicted RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 Q6ZRG5 221 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 Q6ZT83 130 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 MOB1BQ7L9L4 216 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 SELENOHQ8IZQ5 122 aaKnown RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 SUMF1Q8NBK3 374 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 DEFB124Q8NES8 71 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 IL22RA2Q969J5 263 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 OR2J1Q9GZK6 312 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 ARV1Q9H2C2 271 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 CCL28Q9NRJ3 127 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 CARHSP1Q9Y2V2 147 aaKnown RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 OR2W1Q9Y3N9 320 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 ESPL1Q14674 2120 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 FAM186AA6NE01 2351 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 TRAV17A0A0B4J275 112 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 IGKV1D-13A0A0B4J2D9 117 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 IGKV1-6A0A0C4DH72 117 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 H0Y980 276 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 DNASE2O00115 360 aaPredicted RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 LYZL6O75951 148 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 CELA3BP08861 270 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 IGKV1-13P0DP09 117 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 RAC2P15153 192 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 ADCYAP1P18509 176 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 UCP1P25874 307 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 NOVA1P51513 510 aaKnown RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
CMSS1-208ENST00000496116 PCSK4Q6UW60 755 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 C20orf204Q6ZNR8 217 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 GCNT2Q8N0V5 402 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 DMBX1Q8NFW5 382 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 CABLES2Q9BTV7 478 aa9.43□□□□□ -0.9
CMSS1-208ENST00000496116 A0A1W2PR80 420 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 CLEC18AA5D8T8 446 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 SNAPINO95295 136 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF16P17020 682 aaPredicted RBP9.42□□□□□ -0.9
CMSS1-208ENST00000496116 RAB5CP51148 216 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 GABRA6Q16445 453 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 IGFL2Q6UWQ7 119 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 BTNL8Q6UX41 500 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 CLEC9AQ6UXN8 241 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 OR2C3Q8N628 320 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 SCCPDHQ8NBX0 429 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 CLEC18CQ8NCF0 446 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 OR5D13Q8NGL4 314 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 ADAT1Q9BUB4 502 aaKnown RBP9.42□□□□□ -0.9
CMSS1-208ENST00000496116 TMEM231Q9H6L2 316 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 LUZP4Q9P127 313 aa9.42□□□□□ -0.9
CMSS1-208ENST00000496116 IQCF6A8MYZ5 107 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 AQP7O14520 342 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 ADAM20O43506 726 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 PGLYRP1O75594 196 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 SPP1P10451 314 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 SPINK2P20155 84 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 UCP2P55851 309 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 VAMP2P63027 116 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 NHLH2Q02577 135 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF266Q14584 549 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF169Q14929 603 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 SHEQ5VZ18 495 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 Q6P435 159 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 FIP1L1Q6UN15 594 aaKnown RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 MYPOPQ86VE0 399 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 H1FOOQ8IZA3 346 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 PUSL1Q8N0Z8 303 aaKnown RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 CNEP1R1Q8N9A8 125 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 OR1J1Q8NGS3 322 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 SLC25A40Q8TBP6 338 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 SARAFQ96BY9 339 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 BOD1Q96IK1 185 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 SLC25A31Q9H0C2 315 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 ASCL3Q9NQ33 180 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 ZDHHC8Q9ULC8 765 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 CELSR3Q9NYQ7 3312 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 SPAARA0A1B0GVQ0 90 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms