RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	NFYA	P23511	347 aa	Predicted RBP	13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	SEC61A1	P61619	476 aa	Known RBP	13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	FAM90A1	Q86YD7	464 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	CD177	Q8N6Q3	437 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	BOLL	Q8N9W6	283 aa	Known RBP	13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	GALNT11	Q8NCW6	608 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	MITD1	Q8WV92	249 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	OR2A7	Q96R45	310 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	DIRC2	Q96SL1	478 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	CHIA	Q9BZP6	476 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	FXYD6	Q9H0Q3	95 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	METRN	Q9UJH8	293 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	WIPI2	Q9Y4P8	454 aa		13.76	□□□□□ -0.21
HLA-A-208	ENST00000496081	BET1	O15155	118 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	C1QL1	O75973	258 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	SLC22A5	O76082	557 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	SIX6	O95475	246 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	DUS4L	O95620	317 aa	Known RBP	13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	CTSD	P07339	412 aa	Predicted RBP	13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	PSG2	P11465	335 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	CD34	P28906	385 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	PRDX2	P32119	198 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	H2BFS	P57053	126 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	SUPT4H1	P63272	117 aa	Known RBP	13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	COL10A1	Q03692	680 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	TOMM40L	Q969M1	308 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	MOB3A	Q96BX8	217 aa		13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	WDR89	Q96FK6	387 aa	Predicted RBP	13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	C14orf166	Q9Y224	244 aa	Known RBP	13.75	□□□□□ -0.21
HLA-A-208	ENST00000496081	HCFC1	P51610	2035 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	IGKV1D-17	A0A075B6S4	117 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	TRAV39	A0A0B4J263	110 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081		M0R233	179 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	PLAU	P00749	431 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	CD55	P08174	381 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	GIP	P09681	153 aa	Predicted RBP	13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	CTXN2	P0C2S0	81 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	ZNF728	P0DKX0	622 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	AADAC	P22760	399 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	FXYD4	P59646	89 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	HLA-DRB3	P79483	266 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	TLE1	Q04724	770 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	C4orf17	Q53FE4	359 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	BEX5	Q5H9J7	111 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	MOB1B	Q7L9L4	216 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	ZNF843	Q8N446	348 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	OR4A4P	Q8NGN8	299 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081		Q8TCH9	128 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	CASTOR1	Q8WTX7	329 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	ERGIC1	Q969X5	290 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	ZNF486	Q96H40	463 aa	Predicted RBP	13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	MBNL3	Q9NUK0	354 aa	Known RBP	13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	RNF7	Q9UBF6	113 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	DNAJB11	Q9UBS4	358 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	TRAPPC2L	Q9UL33	140 aa		13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	SMG1	Q96Q15	3661 aa	Known RBP	13.74	□□□□□ -0.21
HLA-A-208	ENST00000496081	FAM172BP	A6NC97	362 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	SFT2D2	O95562	160 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	PPY	P01298	95 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	TK1	P04183	234 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	RPS2	P15880	293 aa	Known RBP	13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	ERP29	P30040	261 aa	Known RBP	13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	APOBEC3A	P31941	199 aa	Predicted RBP	13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	OR3A1	P47881	315 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	CCL8	P80075	99 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	DCAF12L2	Q5VW00	463 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	LIN54	Q6MZP7	749 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	CLEC18B	Q6UXF7	455 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	OR2T35	Q8NGX2	323 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	ZFAND1	Q8TCF1	268 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	PHB2	Q99623	299 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	SHARPIN	Q9H0F6	387 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	SEBOX	Q9HB31	216 aa	Predicted RBP	13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	RNF115	Q9Y4L5	304 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	IGHV3OR15-7	A0A075B7D8	119 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081		G3V3Q6	166 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	UCP3	P55916	312 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	AES	Q08117	197 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	MST1L	Q2TV78	715 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	LY6G6F	Q5SQ64	297 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	FAM201A	Q5SY85	155 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	SLC35E4	Q6ICL7	350 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	COQ2	Q96H96	371 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	PCDHB10	Q9UN67	800 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	PPP1R3C	Q9UQK1	317 aa		13.73	□□□□□ -0.21
HLA-A-208	ENST00000496081	DYSF	O75923	2080 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	TMEM30CP	A0ZSE6	113 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081		B8ZZF3	427 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	ZG16	O60844	167 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	ZNF737	O75373	536 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	TUSC2	O75896	110 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	TNFRSF1A	P19438	455 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	CD80	P33681	288 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	KCNJ3	P48549	501 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	RAP2B	P61225	183 aa		13.72	□□□□□ -0.21
HLA-A-208	ENST00000496081	HERV-K104	P61576	105 aa		13.72	□□□□□ -0.21

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