RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 Q6ZS49 121 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 ZNF695Q8IW36 515 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 ZNF664Q8N3J9 261 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 PITPNC1Q9UKF7 332 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 FAM27BQ5VT28 67 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 ZNF880Q6PDB4 577 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 H1FOOQ8IZA3 346 aaPredicted RBP13.19□□□□□ -0.3
SDF4-207ENST00000494748 GAPTQ8N292 157 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 RBM24Q9BX46 236 aaKnown RBP13.19□□□□□ -0.3
SDF4-207ENST00000494748 TPSD1Q9BZJ3 242 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 CHCHD2Q9Y6H1 151 aaPredicted RBP13.19□□□□□ -0.3
SDF4-207ENST00000494748 DVL1O14640 695 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
SDF4-207ENST00000494748 CALHM1Q8IU99 346 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 C17orf78Q8N4C9 275 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 SPIN2AQ99865 258 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 SPIN2BQ9BPZ2 258 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 PYGO2Q9BRQ0 406 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 RPRMQ9NS64 109 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 UBE2J1Q9Y385 318 aaPredicted RBP13.19□□□□□ -0.3
SDF4-207ENST00000494748 NCKAP5O14513 1909 aa13.19□□□□□ -0.3
SDF4-207ENST00000494748 TGOLN2O43493 480 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 TCN2P20062 427 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 IL24Q13007 206 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 BORCS8Q96FH0 119 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 ZNF845Q96IR2 970 aaPredicted RBP13.18□□□□□ -0.3
SDF4-207ENST00000494748 TP53TG5Q9Y2B4 290 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 SLC22A20A6NK97 555 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 NRASP01111 189 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 BTF3P20290 206 aaKnown RBP13.18□□□□□ -0.3
SDF4-207ENST00000494748 NTF4P34130 210 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 VAMP2P63027 116 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 ACTR3CQ9C0K3 210 aaPredicted RBP13.18□□□□□ -0.3
SDF4-207ENST00000494748 CA14Q9ULX7 337 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 DUXBA0A1W2PPF3 345 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 RAB35Q15286 201 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 COA6Q5JTJ3 125 aaKnown RBP13.18□□□□□ -0.3
SDF4-207ENST00000494748 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 RASL10BQ96S79 203 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 CRLF2Q9HC73 371 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 OR14J1Q9UGF5 321 aa13.18□□□□□ -0.3
SDF4-207ENST00000494748 IGKV1-6A0A0C4DH72 117 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 hCG_38984A0A1B0GV85 526 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 SMCO3A2RU48 225 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 TUSC2O75896 110 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 VDAC1P21796 283 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 MRPS34P82930 218 aaKnown RBP13.17□□□□□ -0.3
SDF4-207ENST00000494748 MALLQ13021 153 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 WDR25Q64LD2 544 aaPredicted RBP13.17□□□□□ -0.3
SDF4-207ENST00000494748 FIP1L1Q6UN15 594 aaKnown RBP13.17□□□□□ -0.3
SDF4-207ENST00000494748 THNSL2Q86YJ6 484 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 RSG1Q9BU20 258 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 OR6C6A6NF89 314 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
SDF4-207ENST00000494748 NR2C1P13056 603 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 SPCS3P61009 180 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 COL10A1Q03692 680 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 OR8G1Q15617 311 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 LBHQ53QV2 105 aaPredicted RBP13.17□□□□□ -0.3
SDF4-207ENST00000494748 OR2V1Q8NHB1 315 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 SPACA9Q96E40 222 aaPredicted RBP13.17□□□□□ -0.3
SDF4-207ENST00000494748 SCTP09683 121 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 JMJD7P0C870 316 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 CD27P26842 260 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 GUCA1AP43080 201 aaPredicted RBP13.17□□□□□ -0.3
SDF4-207ENST00000494748 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 Q8NFD4 153 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 GPR87Q9BY21 358 aa13.17□□□□□ -0.3
SDF4-207ENST00000494748 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 DUX1O43812 170 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 NAPSAO96009 420 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 GZMHP20718 246 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 APLNRP35414 380 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 PLA2G5P39877 138 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 SSX2Q16385 188 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 PRAMEF20Q5VT98 475 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 Q9N2K0 584 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 WNT16Q9UBV4 365 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 OPN1MWP04001 364 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 OPN1MW2P0DN77 364 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 OPN1MW3P0DN78 364 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 ARL16Q0P5N6 197 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 ZNF468Q5VIY5 522 aaPredicted RBP13.16□□□□□ -0.3
SDF4-207ENST00000494748 CENPVQ7Z7K6 275 aaPredicted RBP13.16□□□□□ -0.3
SDF4-207ENST00000494748 HAPLN4Q86UW8 402 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 OR5D13Q8NGL4 314 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 SRD5A3Q9H8P0 318 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 CABIN1Q9Y6J0 2220 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 FGF8P55075 233 aaPredicted RBP13.16□□□□□ -0.3
SDF4-207ENST00000494748 ZNF92Q03936 586 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
SDF4-207ENST00000494748 NKAIN1Q4KMZ8 207 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 C7orf61Q8IZ16 206 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 OR1P1Q8NH06 330 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 RAB24Q969Q5 203 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 CABLES2Q9BTV7 478 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms