RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.75□□□□□ -1.01
LINC00488-201ENST00000494582 NPIPA1Q9UND3 350 aa8.75□□□□□ -1.01
LINC00488-201ENST00000494582 TRBV11-1A0A0K0K1C0 115 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 MAP1LC3B2A6NCE7 125 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 A6NCN8 305 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 ANGPTL7O43827 346 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 KBTBD11O94819 623 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 CDS2O95674 445 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 CTSEP14091 401 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 FAHP16930 419 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 MLF1P58340 268 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 RAC1P63000 192 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 TCF23Q7RTU1 214 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 OR2V1Q8NHB1 315 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 P2RX4Q99571 388 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 ZPBPQ9BS86 351 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 AGMATQ9BSE5 352 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 RBM24Q9BX46 236 aaKnown RBP8.74□□□□□ -1.01
LINC00488-201ENST00000494582 MAP1LC3BQ9GZQ8 125 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 ZNF160Q9HCG1 818 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 PNRC2Q9NPJ4 139 aaKnown RBP8.74□□□□□ -1.01
LINC00488-201ENST00000494582 RNF186Q9NXI6 227 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 C3orf85A0A1B0GTC6 90 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 C20orf202A1L168 122 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 C17orf105B2RV13 164 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 HMGB3O15347 200 aaKnown RBP8.74□□□□□ -1.01
LINC00488-201ENST00000494582 CCL1P22362 96 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 RNF151Q2KHN1 245 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 UEVLDQ8IX04 471 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 SELENOHQ8IZQ5 122 aaKnown RBP8.74□□□□□ -1.01
LINC00488-201ENST00000494582 CISD2Q8N5K1 135 aaKnown RBP8.74□□□□□ -1.01
LINC00488-201ENST00000494582 VN1R17PQ8TDU5 208 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 TMEM222Q9H0R3 208 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 OR51I2Q9H344 312 aa8.74□□□□□ -1.01
LINC00488-201ENST00000494582 KNL1Q8NG31 2342 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 MPPED1O15442 326 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 TCN2P20062 427 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 SLC6A8P48029 635 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 BIDP55957 195 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 ID3Q02535 119 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 ARL16Q0P5N6 197 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 PDCD1Q15116 288 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 PSRC1Q6PGN9 363 aaPredicted RBP8.73□□□□□ -1.01
LINC00488-201ENST00000494582 DNM1P34Q6PK57 102 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 AGBL5Q8NDL9 886 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 OR5T1Q8NG75 326 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 MOB3AQ96BX8 217 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 GABRG3Q99928 467 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 PARLQ9H300 379 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 A0A1W2PR80 420 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 F2Z2F3 143 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 K7EP13 123 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 ZNF737O75373 536 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 IGKV1D-33P01593 117 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 IGKV1-33P01594 117 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 CXCL10P02778 98 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 HNF1AP20823 631 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 S100A7P31151 101 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 CHRNA7P36544 502 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 ZNF157P51786 506 aaPredicted RBP8.73□□□□□ -1.01
LINC00488-201ENST00000494582 PRDX4Q13162 271 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 LHX8Q68G74 356 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 MRGPRGQ86SM5 289 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 ZNF703Q9H7S9 590 aaPredicted RBP8.73□□□□□ -1.01
LINC00488-201ENST00000494582 HRASLS2Q9NWW9 162 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 TAAR3PQ9P1P4 343 aa8.73□□□□□ -1.01
LINC00488-201ENST00000494582 NCOA6Q14686 2063 aaPredicted RBP8.72□□□□□ -1.01
LINC00488-201ENST00000494582 A0A0G2JRQ6 117 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 C2orf72A6NCS6 295 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 ZNF814B7Z6K7 855 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 SPRY1O43609 319 aaPredicted RBP8.72□□□□□ -1.01
LINC00488-201ENST00000494582 OR5G3P0C626 314 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 OR1D4P47884 311 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 PRSS12P56730 875 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 FAM189A2Q15884 450 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 IZUMO4Q1ZYL8 232 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 NMSQ5H8A3 153 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 DOK3Q7L591 496 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 Q8N976 141 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 CIB3Q96Q77 187 aaPredicted RBP8.72□□□□□ -1.01
LINC00488-201ENST00000494582 HSPB9Q9BQS6 159 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 PNO1Q9NRX1 252 aaKnown RBP8.72□□□□□ -1.01
LINC00488-201ENST00000494582 POLR1DQ9Y2S0 133 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 TRAPPC1Q9Y5R8 145 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 PXMP4Q9Y6I8 212 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 TDRD6O60522 2096 aaKnown RBP8.72□□□□□ -1.01
LINC00488-201ENST00000494582 DOCK11Q5JSL3 2073 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 A0A0J9YY10 115 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 A0A1W2PNV4 684 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 A8MXE2 369 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 SHISA8B8ZZ34 492 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 M0QZ24 198 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 GYPAP02724 150 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 WNT2P09544 360 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 GNRHRP30968 328 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 ADMP35318 185 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 NPBWR2P48146 333 aa8.72□□□□□ -1.01
LINC00488-201ENST00000494582 MEF2BQ02080 365 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms