RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 J3QKU1 62 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 GYPAP02724 150 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 MDH2P40926 338 aaKnown RBP17.24■□□□□ 0.35
KPNA1-210ENST00000494339 HFEQ30201 348 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 SLC36A1Q7Z2H8 476 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 ZDHHC22Q8N966 263 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 CLEC4MQ9H2X3 399 aaPredicted RBP17.24■□□□□ 0.35
KPNA1-210ENST00000494339 ANXA10Q9UJ72 324 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 ZNF222Q9UK12 451 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 USF3Q68DE3 2245 aa17.24■□□□□ 0.35
KPNA1-210ENST00000494339 CREBL2O60519 120 aaPredicted RBP17.23■□□□□ 0.35
KPNA1-210ENST00000494339 LY6HO94772 140 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 GOSR1O95249 250 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 MUC1P15941 1255 aaPredicted RBP17.23■□□□□ 0.35
KPNA1-210ENST00000494339 OR3A1P47881 315 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 ARPC4P59998 168 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 SHEQ5VZ18 495 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 TEX36Q5VZQ5 186 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 STUMQ69YW2 141 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 ZNRF1Q8ND25 227 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 RIMS4Q9H426 269 aaPredicted RBP17.23■□□□□ 0.35
KPNA1-210ENST00000494339 ZNF286AQ9HBT8 521 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 Q9N2K0 584 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 PPIAL4EA0A075B759 164 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 PPIAL4DF5H284 164 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 SDCBPO00560 298 aaPredicted RBP17.23■□□□□ 0.35
KPNA1-210ENST00000494339 SSNA1O43805 119 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 PPIAL4FP0DN26 164 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 COL8A2P25067 703 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 CDKN1AP38936 164 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 TSPAN5P62079 268 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 CD83Q01151 205 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 AESQ08117 197 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 GRK1Q15835 563 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 ZNF497Q6ZNH5 498 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 TCTE3Q8IZS6 198 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 TERB2Q8NHR7 220 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 SHARPINQ9H0F6 387 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 RANGRFQ9HD47 186 aaPredicted RBP17.23■□□□□ 0.35
KPNA1-210ENST00000494339 PPIAL4AQ9Y536 164 aa17.23■□□□□ 0.35
KPNA1-210ENST00000494339 DCHS2Q6V1P9 2916 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 TRAV39A0A0B4J263 110 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 CLEC18AA5D8T8 446 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 ZNF737O75373 536 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 FCN2Q15485 313 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 ZNF626Q68DY1 528 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 SP5Q6BEB4 398 aaPredicted RBP17.22■□□□□ 0.35
KPNA1-210ENST00000494339 CLEC18BQ6UXF7 455 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 OVCH2Q7RTZ1 564 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 C5orf24Q7Z6I8 188 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 CLEC18CQ8NCF0 446 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 EHFQ9NZC4 300 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 MAB21L2Q9Y586 359 aa17.22■□□□□ 0.35
KPNA1-210ENST00000494339 TRAV38-1A0A0B4J264 116 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 A0A1B0GW55 424 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 LGALS8O00214 317 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4L2P0CJ85 424 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4L3P0CJ86 424 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4L4P0CJ87 422 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4L5P0CJ88 424 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4L6P0CJ89 424 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4L7P0CJ90 424 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 VSIG10L2P0DP72 767 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 SELLP14151 372 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 RCC1P18754 421 aaPredicted RBP17.21■□□□□ 0.35
KPNA1-210ENST00000494339 CDK10Q15131 360 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 ATPAF1Q5TC12 328 aaPredicted RBP17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4L9Q6RFH8 374 aaPredicted RBP17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DRAXINQ8NBI3 349 aaPredicted RBP17.21■□□□□ 0.35
KPNA1-210ENST00000494339 CCL13Q99616 98 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 SEC22CQ9BRL7 303 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 SEBOXQ9HB31 216 aaPredicted RBP17.21■□□□□ 0.35
KPNA1-210ENST00000494339 DUX4Q9UBX2 424 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 A8MV72 311 aaPredicted RBP17.21■□□□□ 0.35
KPNA1-210ENST00000494339 GSTT2P0CG29 244 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 COX6B1P14854 86 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 TLE4Q04727 773 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 SRSF7Q16629 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
KPNA1-210ENST00000494339 TPRX1Q8N7U7 411 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 COQ2Q96H96 371 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 SCGB3A2Q96PL1 93 aa17.21■□□□□ 0.35
KPNA1-210ENST00000494339 CRYBG3Q68DQ2 2970 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 TRBV6-6A0A0A6YYG2 114 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 CEACAM18A8MTB9 384 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 H7C1Q1 480 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 SULT1A3P0DMM9 295 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 SULT1A4P0DMN0 295 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 EDDM3AQ14507 147 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 ZNF561Q8N587 486 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 MRGPRFQ96AM1 343 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 SNX22Q96L94 193 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 PLEKHF2Q9H8W4 249 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 ZNF69Q9UC07 566 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 KIF25Q9UIL4 384 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 TRAPPC2LQ9UL33 140 aa17.2■□□□□ 0.34
KPNA1-210ENST00000494339 USP9YO00507 2555 aaPredicted RBP17.19■□□□□ 0.34
KPNA1-210ENST00000494339 TMEM30CPA0ZSE6 113 aa17.19■□□□□ 0.34
KPNA1-210ENST00000494339 KCNJ3P48549 501 aa17.19■□□□□ 0.34
KPNA1-210ENST00000494339 ZFP69Q49AA0 526 aa17.19■□□□□ 0.34
KPNA1-210ENST00000494339 KRBOX4Q5JUW0 171 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms