RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PANK3Q9H999 370 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 NANOGQ9H9S0 305 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 SH2D2AQ9NP31 389 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 CISHQ9NSE2 258 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 LYRM2Q9NU23 88 aaPredicted RBP1.72□□□□□ -2.13
PTPN12-212ENST00000494248 DMAC2Q9NW81 257 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 CALYQ9NYX4 217 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 THYN1Q9P016 225 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 SPRR3Q9UBC9 169 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 SHPKQ9UHJ6 478 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 GLS2Q9UI32 602 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 VAX2Q9UIW0 290 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 VSIG4Q9Y279 399 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 ZNF780BQ9Y6R6 833 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 PCNX3Q9H6A9 2034 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 RB1CC1Q8TDY2 1594 aa1.72□□□□□ -2.13
PTPN12-212ENST00000494248 TRAV8-2A0A0B4J237 113 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TRAV39A0A0B4J263 110 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 IGHV3OR16-9A0A0B4J2B5 98 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM150BA6NC51 233 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TRABD2BA6NFA1 517 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 CCDC160A6NGH7 325 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 OR5H14A6NHG9 310 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 EEF1E1-BLOC1S5C9J1V9 151 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 H7C1H1 209 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 J3QT63 122 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 K7ENP7 123 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 K7ERU9 68 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 DEGS1O15121 323 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 EEF1E1O43324 174 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 CHST10O43529 356 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 HCRTR1O43613 425 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 POP7O75817 140 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 SUPT7LO94864 414 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 YIF1AO95070 293 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TNFSF15O95150 251 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 AIFM1O95831 613 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 C6orf47O95873 294 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TSHBP01222 138 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 IGKV1D-16P01601 117 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 IGHG2P01859 326 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 C1QBP02746 253 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 REG1AP05451 166 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 IGKV5-2P06315 115 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 DBIP07108 87 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 PFN1P07737 140 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 CSF3P09919 207 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 METTL15P1P0C7V9 234 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 MPC1LP0DKB6 136 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 NELFEP18615 380 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 GATA2P23769 480 aaPredicted RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 CDK2P24941 298 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 AGTR1P30556 359 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 S100A7P31151 101 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 PHBP35232 272 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 MDH2P40926 338 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 RPL29P47914 159 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 REG1BP48304 166 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 MARCKSL1P49006 195 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 RBP2P50120 134 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 RND2P52198 227 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 H2BFSP57053 126 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 KLF3P57682 345 aaPredicted RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 RPS28P62857 69 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 CDK5Q00535 292 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 ZNF616Q08AN1 781 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 PMAIP1Q13794 54 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 EBPQ15125 230 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 SHHQ15465 462 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TGIF1Q15583 401 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 MUC21Q5SSG8 566 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 DNLZQ5SXM8 178 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 RSBN1Q5VWQ0 802 aaPredicted RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 ANKRD22Q5VYY1 191 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 CNIH2Q6PI25 160 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 AGTRAPQ6RW13 159 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 ALKAL1Q6UXT8 129 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 DGAT2L6Q6ZPD8 337 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TMPPEQ6ZT21 453 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 LRRTM1Q86UE6 522 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 NAA40Q86UY6 237 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 TGIF2LYQ8IUE0 185 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 UBALD2Q8IYN6 164 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 UMODL1-AS1Q8N2C9 162 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 OSR2Q8N2R0 312 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 SLC35F6Q8N357 371 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 MUC15Q8N387 334 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 FAM24BQ8N5W8 94 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 NPWQ8N729 165 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 ZNF283Q8N7M2 679 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 ZNF491Q8N8L2 437 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 OR51S1Q8NGJ8 323 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 OR10G4Q8NGN3 311 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 OR9I1Q8NGQ6 314 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 OR1S1Q8NH92 325 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 CANT1Q8WVQ1 401 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 RXFP2Q8WXD0 754 aa1.71□□□□□ -2.14
PTPN12-212ENST00000494248 SRSF12Q8WXF0 261 aaKnown RBP1.71□□□□□ -2.14
PTPN12-212ENST00000494248 GALMQ96C23 342 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms