RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CHMP1AQ9HD42 196 aaPredicted RBP12□□□□□ -0.49
BRCA1-223ENST00000494123 OR6C3Q9NZP0 311 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 DSCAML1Q8TD84 2053 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 RGS5O15539 181 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 HPGDSO60760 199 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 HIST1H1DP16402 221 aaKnown RBP12□□□□□ -0.49
BRCA1-223ENST00000494123 GLP1RP43220 463 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 FOXB2Q5VYV0 432 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 KIR3DL3Q8N743 410 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ZNF565Q8N9K5 539 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ZNF714Q96N38 554 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 C6orf62Q9GZU0 229 aaPredicted RBP12□□□□□ -0.49
BRCA1-223ENST00000494123 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ZMAT3Q9HA38 289 aaKnown RBP12□□□□□ -0.49
BRCA1-223ENST00000494123 BATF3Q9NR55 127 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 TRAPPC2LQ9UL33 140 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 UBE2J1Q9Y385 318 aaPredicted RBP12□□□□□ -0.49
BRCA1-223ENST00000494123 AUP1Q9Y679 476 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 TLN2Q9Y4G6 2542 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 A0A0A6YYH2 397 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 hCG_1809904A0A1W2PP81 198 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 A0A1W2PPE2 198 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 A0A1W2PR64 198 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 A0A1W2PRV1 198 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 A6NJ64 397 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 FAM25AB3EWG3 89 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 FAM25CB3EWG5 89 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 FAM25GB3EWG6 89 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 APOA1P02647 267 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 EIF4EP06730 217 aaKnown RBP11.99□□□□□ -0.49
BRCA1-223ENST00000494123 ZNF728P0DKX0 622 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 GNB3P16520 340 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 CCL3L1P16619 93 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 PAX8Q06710 450 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 CR1LQ2VPA4 569 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 Q71RC1 249 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-223ENST00000494123 RTN4RL2Q86UN3 420 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 OR4K15Q8NH41 348 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 MCFD2Q8NI22 146 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 CCDC107Q8WV48 283 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 CYYR1Q96J86 154 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 CMSS1Q9BQ75 279 aaKnown RBP11.99□□□□□ -0.49
BRCA1-223ENST00000494123 PCGF1Q9BSM1 259 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 TMPRSS13Q9BYE2 586 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 GAL3ST2Q9H3Q3 398 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 AK3Q9UIJ7 227 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 KPTNQ9Y664 436 aa11.99□□□□□ -0.49
BRCA1-223ENST00000494123 TRAV18A0A075B6X5 111 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 A6NHS1 94 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 SERPINE3A8MV23 424 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 M0R1W7 72 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 TOX4O94842 621 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 MT-ND4P03905 459 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 CD3GP09693 182 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 CDK2P24941 298 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 ARFRP1Q13795 201 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 CDNFQ49AH0 187 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 TMEM69Q5SWH9 247 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 OLFML2AQ68BL7 652 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 OR13A1Q8NGR1 328 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 SETD6Q8TBK2 473 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 MRGPRDQ8TDS7 321 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 WDFY2Q96P53 400 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 SLIRPQ9GZT3 109 aaKnown RBP11.98□□□□□ -0.49
BRCA1-223ENST00000494123 RIMS4Q9H426 269 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-223ENST00000494123 ADAM30Q9UKF2 790 aa11.98□□□□□ -0.49
BRCA1-223ENST00000494123 TRAV39A0A0B4J263 110 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 MFNGO00587 321 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 GSTP1P09211 210 aaKnown RBP11.97□□□□□ -0.49
BRCA1-223ENST00000494123 ELK1P19419 428 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 HNF1AP20823 631 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 MRPL30Q8TCC3 161 aaKnown RBP11.97□□□□□ -0.49
BRCA1-223ENST00000494123 CORO2AQ92828 525 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 C12orf4Q9NQ89 552 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 TAS2R3Q9NYW6 316 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 KIAA2026Q5HYC2 2103 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 ZNF729A6NN14 1252 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-223ENST00000494123 CTDSP2O14595 271 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 XRCC3O43542 346 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 TALDO1P37837 337 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 MNDAP41218 407 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 C6orf183Q5T699 404 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 TRAT1Q6PIZ9 186 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 C1orf122Q6ZSJ8 110 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 VMO1Q7Z5L0 202 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 IZUMO1Q8IYV9 350 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 GAPTQ8N292 157 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 TEX29Q8N6K0 151 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 DTX3Q8N9I9 347 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 HDHD3Q9BSH5 251 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-223ENST00000494123 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 METTL8Q9H825 291 aaKnown RBP11.97□□□□□ -0.49
BRCA1-223ENST00000494123 SIRT7Q9NRC8 400 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 KCNIP1Q9NZI2 227 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 KCNK7Q9Y2U2 307 aa11.97□□□□□ -0.49
BRCA1-223ENST00000494123 TMEM235A6NFC5 223 aa11.96□□□□□ -0.5
BRCA1-223ENST00000494123 C17orf98A8MV24 154 aa11.96□□□□□ -0.5
BRCA1-223ENST00000494123 CLPXO76031 633 aa11.96□□□□□ -0.5
BRCA1-223ENST00000494123 NAPSAO96009 420 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms