RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FOXN4Q96NZ1 517 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 OXGR1Q96P68 337 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 RSRP1Q9BUV0 290 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 LINC00470Q9BZP3 86 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 WDR13Q9H1Z4 485 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 POFUT1Q9H488 388 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 MEPEQ9NQ76 525 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-234ENST00000493923 MED29Q9NX70 200 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 PITPNC1Q9UKF7 332 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 ZDHHC8Q9ULC8 765 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 NOP16Q9Y3C1 178 aaKnown RBP6.98□□□□□ -1.29
HDAC6-234ENST00000493923 V9GY05 133 aa6.98□□□□□ -1.29
HDAC6-234ENST00000493923 WNK2Q9Y3S1 2297 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 TRAV36DV7A0A075B6V5 113 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 A0A0A6YYH2 397 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 A0A0B4J2A0 478 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 hCG_1809904A0A1W2PP81 198 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1W2PR64 198 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1W2PRV1 198 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 A6NJ64 397 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 FAM157AC9JC47 383 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LYNX1G3V0Z9 82 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 GLCEO94923 617 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 RPP14O95059 124 aaKnown RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 YIF1AO95070 293 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 VAMP5O95183 116 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 WNT11O96014 354 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 IGKV3-15P01624 115 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 HLA-HP01893 362 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 GAPDHP04406 335 aaKnown RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 OR4A8P0C604 315 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 PATE4P0C8F1 98 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LYNX1P0DP58 116 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LYL1P12980 280 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF43P17038 809 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 CFPP27918 469 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 IL2RGP31785 369 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 CD80P33681 288 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 TAS2R41P59536 307 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 TGFBR3Q03167 851 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 GGTLC2Q14390 218 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 INSL4Q14641 139 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 CDK5R1Q15078 307 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 UBE2V2Q15819 145 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 C2orf68Q2NKX9 166 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 ALG10BQ5I7T1 473 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 STEAP1BQ6NZ63 245 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF529Q6P280 563 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 KLHL24Q6TFL4 600 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 DHRS11Q6UWP2 260 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LINC00114Q6XXX2 140 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF620Q6ZNG0 422 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 H1FNTQ75WM6 255 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 SSX8Q7RTT4 187 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LYG2Q86SG7 212 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 C20orf196Q8IYI0 205 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LRRC18Q8N456 261 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 BOLLQ8N9W6 283 aaKnown RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 OR5T1Q8NG75 326 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 OR10H4Q8NGA5 316 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 OR10A7Q8NGE5 316 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 OR51S1Q8NGJ8 323 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 OR5AK2Q8NH90 309 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LYPD6BQ8NI32 183 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 PPP1R1CQ8WVI7 109 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 HPSE2Q8WWQ2 592 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 GHSRQ92847 366 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 CPNE2Q96FN4 548 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 PACRGQ96M98 296 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 AQP10Q96PS8 301 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 ARHGDIGQ99819 225 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 PRRT1Q99946 306 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 HRH4Q9H3N8 390 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 TMEM231Q9H6L2 316 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 EGLN3Q9H6Z9 239 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 ISG20L2Q9H9L3 353 aaKnown RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 KLK11Q9UBX7 282 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 SHPKQ9UHJ6 478 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 OR52A1Q9UKL2 312 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 STRAPQ9Y3F4 350 aaKnown RBP6.97□□□□□ -1.29
HDAC6-234ENST00000493923 ARHGAP32A7KAX9 2087 aa6.97□□□□□ -1.29
HDAC6-234ENST00000493923 LRP5LA4QPB2 252 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 B4DEV8 164 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 C11orf98E9PRG8 122 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 J3QLW9 94 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 PLPP3O14495 311 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 TSPAN15O95858 294 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 SLC25A16P16260 332 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF19P17023 458 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 SRMP19623 302 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 CDK2P24941 298 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 G0S2P27469 103 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 PRSS3P35030 304 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 RPL4P36578 427 aaKnown RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 CD200P41217 278 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 CDKN1BP46527 198 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 UCP2P55851 309 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 UBE2NP61088 152 aaKnown RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 RANP62826 216 aaKnown RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 RPP30P78346 268 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms