RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 NUDT16L1Q9BRJ7 211 aaKnown RBP5.52□□□□□ -1.53
VPS52-219ENST00000493379 TMED9Q9BVK6 235 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 WDR12Q9GZL7 423 aaKnown RBP5.52□□□□□ -1.53
VPS52-219ENST00000493379 METTL9Q9H1A3 318 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 SLC23A1Q9UHI7 598 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 AUP1Q9Y679 476 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 ARHGAP32A7KAX9 2087 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 WNK2Q9Y3S1 2297 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 SACSQ9NZJ4 4579 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 TRAV24A0A0B4J272 114 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 A0A1W2PPK0 400 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 NKX6-3A6NJ46 265 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 C17orf98A8MV24 154 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 TMEM14DPA8MWL7 114 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 SLC33A1O00400 549 aaPredicted RBP5.51□□□□□ -1.53
VPS52-219ENST00000493379 SLC17A2O00624 439 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 MGST3O14880 152 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 LDLRAD4O15165 306 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 OR2H2O95918 312 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 HAND1O96004 215 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 MAS1P04201 325 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 GTF2F2P13984 249 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 SRD5A1P18405 259 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 PRTN3P24158 256 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 OR3A4PP47883 348 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 POU3F4P49335 361 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 CAPZA1P52907 286 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 COL10A1Q03692 680 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 RNF151Q2KHN1 245 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 MPV17LQ2QL34 196 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 HSD17B12Q53GQ0 312 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 FIP1L1Q6UN15 594 aaKnown RBP5.51□□□□□ -1.53
VPS52-219ENST00000493379 BTNL3Q6UXE8 466 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 TPRA1Q86W33 373 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 OSR2Q8N2R0 312 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 FGFRL1Q8N441 504 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 FAM89BQ8N5H3 189 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 RNF152Q8N8N0 203 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 OR5D18Q8NGL1 313 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 NANPQ8TBE9 248 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 TNFAIP8L1Q8WVP5 186 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 CFHR4Q92496 578 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 EMG1Q92979 244 aaKnown RBP5.51□□□□□ -1.53
VPS52-219ENST00000493379 TMEM203Q969S6 136 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 RFT1Q96AA3 541 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 YIPF6Q96EC8 236 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 WDFY2Q96P53 400 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 MRI1Q9BV20 369 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 TM2D1Q9BX74 207 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 RCC2Q9P258 522 aaKnown RBP5.51□□□□□ -1.53
VPS52-219ENST00000493379 IL36RNQ9UBH0 155 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 GLS2Q9UI32 602 aa5.51□□□□□ -1.53
VPS52-219ENST00000493379 PRSS29PA6NIE9 313 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 CDRT1O95170 752 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 TFF1P04155 84 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 OCMP0CE72 109 aaPredicted RBP5.5□□□□□ -1.53
VPS52-219ENST00000493379 PRKACAP17612 351 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 HNF1AP20823 631 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 GABRA2P47869 451 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 OR3A1P47881 315 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 RBM11P57052 281 aaKnown RBP5.5□□□□□ -1.53
VPS52-219ENST00000493379 RPL31P62899 125 aaKnown RBP5.5□□□□□ -1.53
VPS52-219ENST00000493379 RSU1Q15404 277 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 SIGIRRQ6IA17 410 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 HCP5Q6MZN7 132 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 GLIPR1L1Q6UWM5 242 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 TCF23Q7RTU1 214 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 SATL1Q86VE3 508 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 NR2C2APQ86WQ0 139 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 Q8N3U1 123 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 TMEM104Q8NE00 496 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 OR4S1Q8NGB4 309 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 OR6M1Q8NGM8 313 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 PTX4Q96A99 478 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 COQ2Q96H96 371 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 TBX15Q96SF7 602 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 GPER1Q99527 375 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 SLITRK2Q9H156 845 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 METTL8Q9H825 291 aaKnown RBP5.5□□□□□ -1.53
VPS52-219ENST00000493379 LPAR2Q9HBW0 351 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 EXOSC4Q9NPD3 245 aaKnown RBP5.5□□□□□ -1.53
VPS52-219ENST00000493379 C19orf12Q9NSK7 152 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 TXNL4BQ9NX01 149 aaKnown RBP5.5□□□□□ -1.53
VPS52-219ENST00000493379 TAS2R3Q9NYW6 316 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 NUP50Q9UKX7 468 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 STUB1Q9UNE7 303 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 ING4Q9UNL4 249 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 ST3GAL6Q9Y274 331 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 MRPS28Q9Y2Q9 187 aaKnown RBP5.5□□□□□ -1.53
VPS52-219ENST00000493379 LINC00312Q9Y6C7 94 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 V9GY05 133 aa5.5□□□□□ -1.53
VPS52-219ENST00000493379 A0A087X0M5 115 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 CENPVL3A0A0U1RRI6 287 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 A0A1B0GX30 115 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 FUOMA2VDF0 154 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 IFITM5A6NNB3 132 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 FOXI3A8MTJ6 420 aaPredicted RBP5.49□□□□□ -1.53
VPS52-219ENST00000493379 NPIPB11E5RHQ5 1161 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 DEGS1O15121 323 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 CA11O75493 328 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms