RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 AKR1C4P17516 323 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 CBX5P45973 191 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 SMAGPQ0VAQ4 97 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 GNA13Q14344 377 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 ZNF235Q14590 738 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 SSX1Q16384 188 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 DNM1P34Q6PK57 102 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 ZNF773Q6PK81 442 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 CYB561D1Q8N8Q1 229 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 OR4P4Q8NGL7 312 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 OR5M1Q8NGP8 315 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 TWIST2Q8WVJ9 160 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 CCDC94Q9BW85 323 aaPredicted RBP3.09□□□□□ -1.91
VPS13A-212ENST00000493341 LHX9Q9NQ69 397 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 FBXO6Q9NRD1 293 aaPredicted RBP3.09□□□□□ -1.91
VPS13A-212ENST00000493341 TMEM14AQ9Y6G1 99 aa3.09□□□□□ -1.91
VPS13A-212ENST00000493341 NCOA3Q9Y6Q9 1424 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 PFDN6O15212 129 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 SSNA1O43805 119 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 CYB5R3P00387 301 aaPredicted RBP3.09□□□□□ -1.92
VPS13A-212ENST00000493341 HLA-DQB1P01920 261 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 TYMSP04818 313 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 MRPL3P09001 348 aaKnown RBP3.09□□□□□ -1.92
VPS13A-212ENST00000493341 ZNF7P17097 686 aaPredicted RBP3.09□□□□□ -1.92
VPS13A-212ENST00000493341 FAM3AP98173 230 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 STX5Q13190 355 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 UAP1Q16222 522 aaPredicted RBP3.09□□□□□ -1.92
VPS13A-212ENST00000493341 NXNL2Q5VZ03 156 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 Q8N402 240 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 SLC25A29Q8N8R3 303 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 OR5T1Q8NG75 326 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 UGT2B28Q9BY64 529 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 ZNF355PQ9NSJ1 428 aa3.09□□□□□ -1.92
VPS13A-212ENST00000493341 ZNF706Q9Y5V0 76 aaPredicted RBP3.09□□□□□ -1.92
VPS13A-212ENST00000493341 LAMC1P11047 1609 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 NEXMIFQ5QGS0 1516 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 IGHV3-49A0A0A0MS15 119 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 TMEM72A0PK05 275 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 SCO1O75880 301 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 LYPLA2O95372 231 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 SERPINA6P08185 405 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 CECR9P0C854 216 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 IMPA1P29218 277 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 IFNGR2P38484 337 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 MNAT1P51948 309 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 NKX2-5P52952 324 aaPredicted RBP3.08□□□□□ -1.92
VPS13A-212ENST00000493341 CMC4P56277 68 aaPredicted RBP3.08□□□□□ -1.92
VPS13A-212ENST00000493341 TAS2R43P59537 309 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 BASP1P80723 227 aaKnown RBP3.08□□□□□ -1.92
VPS13A-212ENST00000493341 FADDQ13158 208 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 CLLU1OSQ5K130 101 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 FAM162BQ5T6X4 162 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 MKXQ8IYA7 352 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 CASTOR1Q8WTX7 329 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 NARS2Q96I59 477 aaKnown RBP3.08□□□□□ -1.92
VPS13A-212ENST00000493341 YPEL4Q96NS1 127 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 TBL1YQ9BQ87 522 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 CDCA4Q9BXL8 241 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 ULBP1Q9BZM6 244 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 ZNF436Q9C0F3 470 aaPredicted RBP3.08□□□□□ -1.92
VPS13A-212ENST00000493341 TP53TG1Q9Y2A0 90 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 SNX10Q9Y5X0 201 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 WSB1Q9Y6I7 421 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 MAP3K5Q99683 1374 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 RAB3GAP2Q9H2M9 1393 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 KNDC1Q76NI1 1749 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 RIMS2Q9UQ26 1411 aa3.08□□□□□ -1.92
VPS13A-212ENST00000493341 MEGF6O75095 1541 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.07□□□□□ -1.92
VPS13A-212ENST00000493341 AZIN1O14977 448 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 CA2P00918 260 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 MAS1P04201 325 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 RPS17P08708 135 aaKnown RBP3.07□□□□□ -1.92
VPS13A-212ENST00000493341 SEC11BP0C7V7 166 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 SCGB1C2P0DMR2 95 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 PYCR1P32322 319 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 CEBPGP53567 150 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 ELOCQ15369 112 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 CLEC12BQ2HXU8 276 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 CST9Q5W186 159 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 ZFP1Q6P2D0 407 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 WDR86Q86TI4 376 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 MUC15Q8N387 334 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 OR52E4Q8NGH9 312 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 CIRBP-AS1Q8TBR5 109 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 SCGB1C1Q8TD33 95 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 C17orf50Q8WW18 174 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 DERL3Q96Q80 235 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 MARVELD1Q9BSK0 173 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 NDFIP1Q9BT67 221 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 C21orf62Q9NYP8 219 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 ENOPH1Q9UHY7 261 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 TBX21Q9UL17 535 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.07□□□□□ -1.92
VPS13A-212ENST00000493341 MYBPHLA2RUH7 354 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 TMEM210A6NLX4 147 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 GYG2O15488 501 aa3.07□□□□□ -1.92
VPS13A-212ENST00000493341 STX10O60499 249 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms