RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CD3DP04234 171 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 RLN1P04808 185 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 DANCRP0C864 163 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 EGR1P18146 543 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 RBMXP38159 391 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 HOXA4Q00056 320 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 ZNF787Q6DD87 383 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 Q6P435 159 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 DTX2Q86UW9 622 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 BOLLQ8N9W6 283 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 OR2AK2Q8NG84 335 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 VRK1Q99986 396 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 OCSTAMPQ9BR26 566 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 ALX4Q9H161 411 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 DNAJB11Q9UBS4 358 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 ZNF107Q9UII5 783 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 AK3Q9UIJ7 227 aa11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 RAI1Q7Z5J4 1906 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-210ENST00000492909 LRBAP50851 2863 aa11.83□□□□□ -0.51
PDZRN3-210ENST00000492909 TRAV24A0A0B4J272 114 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 RGS11O94810 467 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 HAND1O96004 215 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 GLAP06280 429 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 FCER2P06734 321 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 SOD3P08294 240 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 NFYAP23511 347 aaPredicted RBP11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 RAB14P61106 215 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 RBM39Q14498 530 aaKnown RBP11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 COMMD7Q86VX2 200 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 GVQW1Q8N7I0 195 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 SUMF2Q8NBJ7 301 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 NEK7Q8TDX7 302 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 RDH5Q92781 318 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 WDR89Q96FK6 387 aaPredicted RBP11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 TREM2Q9NZC2 230 aa11.83□□□□□ -0.52
PDZRN3-210ENST00000492909 SIRPB1O00241 398 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 HSPB6O14558 160 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 CYB5R3P00387 301 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 CD8AP01732 235 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 C2orf68Q2NKX9 166 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 C11orf71Q6IPW1 123 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 MUC20Q8N307 709 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 ASB13Q8WXK3 278 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 GSX2Q9BZM3 304 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 UBTD1Q9HAC8 227 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 ZNF701Q9NV72 531 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 OPN4Q9UHM6 478 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 KIF25Q9UIL4 384 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 DSCAMO60469 2012 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 FAM221AA4D161 298 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 RFPL4AA6NLU0 287 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 OR2AT4A6NND4 320 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 ZNF736B4DX44 427 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 RFPL4AL1F8VTS6 287 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 IFNL4K9M1U5 179 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 SLC33A1O00400 549 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 RAB3DO95716 219 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 COX6B1P14854 86 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 CEBPDP49716 269 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 SEC61A1P61619 476 aaKnown RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 PAN3Q58A45 887 aaKnown RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 C1orf87Q8N0U7 546 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 BPIFB2Q8N4F0 458 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 OR5T2Q8NGG2 359 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 CCDC107Q8WV48 283 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 DYRK2Q92630 601 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 HDHD3Q9BSH5 251 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 RAB1BQ9H0U4 201 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 MYOZ1Q9NP98 299 aaPredicted RBP11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 C12orf4Q9NQ89 552 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 ANAPC10Q9UM13 185 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 LAMP3Q9UQV4 416 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
PDZRN3-210ENST00000492909 DCHS2Q6V1P9 2916 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 NBPF19A0A087WUL8 3843 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 IGHV1-69-2A0A0G2JMI3 117 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 GOSR2O14653 212 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 SIX6O95475 246 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 CD74P04233 296 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 RRASP10301 218 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 PSG2P11465 335 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 DTYMKP23919 212 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 LMO1P25800 156 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 H2BFSP57053 126 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 AANATQ16613 207 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 MICBQ29980 383 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 HOGA1Q86XE5 327 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 OR4S1Q8NGB4 309 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 CCL17Q92583 94 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 SLC25A21Q9BQT8 299 aaPredicted RBP11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 ST6GALNAC5Q9BVH7 336 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 CHST6Q9GZX3 395 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 SEBOXQ9HB31 216 aaPredicted RBP11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 TMEM106BQ9NUM4 274 aa11.81□□□□□ -0.52
PDZRN3-210ENST00000492909 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 IGHV3OR15-7A0A075B7D8 119 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms