RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZDHHC8Q9ULC8 765 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 A4GNTQ9UNA3 340 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 TRAV14DV4A0A0A6YYC5 116 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 FAM181BA6NEQ2 426 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 HOXA3O43365 443 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-213ENST00000492506 OR6A2O95222 327 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 LYPD3O95274 346 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 AKAIN1P0CW23 69 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 ATF1P18846 271 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 CCNOP22674 350 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF133P52736 654 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-213ENST00000492506 ACTA2P62736 377 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 ACTG2P63267 376 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 NHLH2Q02577 135 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 TMEM69Q5SWH9 247 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 ARL9Q6T311 187 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 MEPCEQ7L2J0 689 aaKnown RBP10.96□□□□□ -0.65
HDAC3-213ENST00000492506 GLB1L2Q8IW92 636 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 SYS1Q8N2H4 156 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 LNX2Q8N448 690 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 GPR32P1Q8NGA4 272 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 OR6T1Q8NGN1 323 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 NABP1Q96AH0 204 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 HAVCR1Q96D42 359 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 R3HDM4Q96D70 268 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 DIRC2Q96SL1 478 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 ARHGDIGQ99819 225 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 AUNIPQ9H7T9 357 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 CGGBP1Q9UFW8 167 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-213ENST00000492506 TIMM10BQ9Y5J6 103 aa10.96□□□□□ -0.65
HDAC3-213ENST00000492506 OR5H14A6NHG9 310 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 CH25HO95992 272 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 NGFP01138 241 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 THY1P04216 161 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 CD74P04233 296 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 VSIG10L2P0DP72 767 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
HDAC3-213ENST00000492506 ZNF32P17041 273 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 TNFAIP6P98066 277 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-213ENST00000492506 CYCSP99999 105 aaKnown RBP10.95□□□□□ -0.66
HDAC3-213ENST00000492506 COTL1Q14019 142 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 C10orf128Q5T292 105 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 ASPHD2Q6ICH7 369 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 ZNF774Q6NX45 483 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 BAP18Q8IXM2 172 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 CMTM4Q8IZR5 234 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 ARRDC1Q8N5I2 433 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 OR2T33Q8NG76 320 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 OR2G2Q8NGZ5 317 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 LGALS14Q8TCE9 139 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 CHST5Q9GZS9 411 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 NCOR1P1Q9H4R4 102 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 C1RLQ9NZP8 487 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 MTFP1Q9UDX5 166 aa10.95□□□□□ -0.66
HDAC3-213ENST00000492506 C5orf49A4QMS7 147 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 SRRM5B3KS81 715 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 M0QZ24 198 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 MAGEB4O15481 346 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-213ENST00000492506 OGG1O15527 345 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 FBXO24O75426 580 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 NDUFA7O95182 113 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 IGHG1P01857 330 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 WNT2P09544 360 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 ASAH2BP0C7U1 165 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 LINC00614P0C842 121 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 CPT2P23786 658 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 ZNF84P51523 738 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 OR10A3P58181 314 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 ACTBP60709 375 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 NUTF2P61970 127 aaKnown RBP10.94□□□□□ -0.66
HDAC3-213ENST00000492506 PPP1CBP62140 327 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 MRPS34P82930 218 aaKnown RBP10.94□□□□□ -0.66
HDAC3-213ENST00000492506 PSG4Q00888 419 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 ST3GAL3Q11203 375 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 DEFB112Q30KQ8 113 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 RNASE12Q5GAN4 147 aaKnown RBP10.94□□□□□ -0.66
HDAC3-213ENST00000492506 OR52W1Q6IF63 320 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 ZNF383Q8NA42 475 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 PNLDC1Q8NA58 520 aaKnown RBP10.94□□□□□ -0.66
HDAC3-213ENST00000492506 NOXO1Q8NFA2 376 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 OR4F5Q8NH21 305 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 WDR89Q96FK6 387 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-213ENST00000492506 SAMD8Q96LT4 415 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 GPR61Q9BZJ8 451 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 HAO2Q9NYQ3 351 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 OR5V1Q9UGF6 321 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 FOXJ3Q9UPW0 622 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 DNAH3Q8TD57 4116 aa10.94□□□□□ -0.66
HDAC3-213ENST00000492506 RYR3Q15413 4870 aa10.93□□□□□ -0.66
HDAC3-213ENST00000492506 A0A087X0M5 115 aa10.93□□□□□ -0.66
HDAC3-213ENST00000492506 IGKV1D-43A0A0B4J1Z2 117 aa10.93□□□□□ -0.66
HDAC3-213ENST00000492506 TRAV40A0A0B4J280 105 aa10.93□□□□□ -0.66
HDAC3-213ENST00000492506 TEX13DA0A0J9YY54 714 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-213ENST00000492506 A0A1B0GX30 115 aa10.93□□□□□ -0.66
HDAC3-213ENST00000492506 CLPSL1A2RUU4 121 aa10.93□□□□□ -0.66
HDAC3-213ENST00000492506 CEACAM18A8MTB9 384 aa10.93□□□□□ -0.66
HDAC3-213ENST00000492506 RNASEK-C17orf49H0YIS7 233 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms