RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ELMOD3Q96FG2 381 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 NRIP2Q9BQI9 281 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 PECRQ9BY49 303 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 LPAR2Q9HBW0 351 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLDN1-202ENST00000490800 IL36RNQ9UBH0 155 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 KLK11Q9UBX7 282 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 ST3GAL6Q9Y274 331 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 POLDIP2Q9Y2S7 368 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 A0A1B0GVG6 124 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 ANKRD20A5PA0PJZ0 165 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 MEIS3P1A6NDR6 274 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A10PA6NDY2 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A18PA6NE21 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A16PA6NEW6 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A20PA6NIJ5 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A8PA6NJQ4 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A7PA6NKC0 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 A6NLC8 198 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A22PA8MWA6 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A12PA8MX19 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A5PA8MXJ8 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A23PA8MXZ1 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 LYRM1O43325 122 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 TPD52L2O43399 206 aaKnown RBP6.3□□□□□ -1.4
CLDN1-202ENST00000490800 NOS1APO75052 506 aaPredicted RBP6.3□□□□□ -1.4
CLDN1-202ENST00000490800 PDCD6O75340 191 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 CA11O75493 328 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 RP2O75695 350 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 RBBP9O75884 186 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 PTTG1O95997 202 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 ADH4P08319 380 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A15PP0C7V4 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A13PP0C7W8 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A14PP0C7W9 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 FAM90A24PP0C7X0 464 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 GSTT2BP0CG30 244 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 PRKACAP17612 351 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 PMELP40967 661 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 SNU13P55769 128 aaKnown RBP6.3□□□□□ -1.4
CLDN1-202ENST00000490800 GNG2P59768 71 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 LMO4P61968 165 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 MRPS11P82912 194 aaKnown RBP6.3□□□□□ -1.4
CLDN1-202ENST00000490800 SSBP1Q04837 148 aaKnown RBP6.3□□□□□ -1.4
CLDN1-202ENST00000490800 IL13RA2Q14627 380 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 TRIM16LQ309B1 348 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 AVPI1Q5T686 147 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 WDR82Q6UXN9 313 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 Q6ZNX1 250 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 C6orf201Q7Z4U5 140 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 TRAPPC6BQ86SZ2 158 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 GLCCI1Q86VQ1 547 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 Q8IYB0 196 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 TOMM5Q8N4H5 51 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 MINDY2Q8NBR6 621 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 NUDCD2Q8WVJ2 157 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 ITLN1Q8WWA0 313 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 EMG1Q92979 244 aaKnown RBP6.3□□□□□ -1.4
CLDN1-202ENST00000490800 TMEM186Q96B77 213 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 NEDD4LQ96PU5 975 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 OR2V2Q96R30 315 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 SULT4A1Q9BR01 284 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 RHOFQ9HBH0 211 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 HES4Q9HCC6 221 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 DECR2Q9NUI1 292 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 UFSP2Q9NUQ7 469 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 PLEKHJ1Q9NW61 149 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 HIF1ANQ9NWT6 349 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 C1orf123Q9NWV4 160 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 ZDHHC8Q9ULC8 765 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 HSF4Q9ULV5 492 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 ANAPC10Q9UM13 185 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 CACNG2Q9Y698 323 aa6.3□□□□□ -1.4
CLDN1-202ENST00000490800 IGHV1-69-2A0A0G2JMI3 117 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 hCG_1807616A0A1W2PRN6 198 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 SERPINE3A8MV23 424 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 TCF21O43680 179 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 OR7C1O76099 320 aaPredicted RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 NXPH2O95156 264 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 ECDO95905 644 aaPredicted RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 FCER2P06734 321 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 MSMBP08118 114 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 CD55P08174 381 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 EGR1P18146 543 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 FUT3P21217 361 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 TNFSF4P23510 183 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 DUSP1P28562 367 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 BTCP35070 178 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 RCVRNP35243 200 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 CFHR2P36980 270 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 RBMXP38159 391 aaKnown RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 AP3S2P59780 193 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 GMFBP60983 142 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 TNFAIP6P98066 277 aaPredicted RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 HOXA4Q00056 320 aaPredicted RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 DYRK1AQ13627 763 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 ARL6IP1Q15041 203 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 MPV17LQ2QL34 196 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 PCGF3Q3KNV8 242 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 MZT2BQ6NZ67 158 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms