RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 S100A13Q99584 98 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 CCDC90BQ9GZT6 254 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 IFT22Q9H7X7 185 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 CALYQ9NYX4 217 aa14.61□□□□□ -0.07
COL9A3-214ENST00000490398 KBTBD11-OT1A0A1B0GTJ5 212 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 A0A1B0GUS0 222 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 A6NDX4 124 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 ZNF729A6NN14 1252 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-214ENST00000490398 IGLV1-47P01700 117 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 HSMCR30P0CW71 290 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 GTF2F2P13984 249 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 SSTR5P35346 364 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 LTC4SQ16873 150 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 ATAD3CQ5T2N8 411 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 AWAT2Q6E213 333 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 FAM53AQ6NSI3 398 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-214ENST00000490398 TMEM219Q86XT9 240 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 MS4A15Q8N5U1 240 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 NDNFQ8TB73 568 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 BARHL1Q9BZE3 327 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 KCNK15Q9H427 330 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 OR6C3Q9NZP0 311 aa14.6□□□□□ -0.07
COL9A3-214ENST00000490398 ZNF780AO75290 641 aaPredicted RBP14.59□□□□□ -0.07
COL9A3-214ENST00000490398 CD24P25063 80 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 NFYBP25208 207 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 CD34P28906 385 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 PAX5Q02548 391 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 TPBGQ13641 420 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 MINOS1Q5TGZ0 78 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 OR10K2Q6IF99 312 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 PRSS48Q7RTY5 328 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 CDH26Q8IXH8 852 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 SGMS2Q8NHU3 365 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 CCDC107Q8WV48 283 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 UFD1Q92890 307 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 GFI1Q99684 422 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 CITED1Q99966 193 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 NCOR1P1Q9H4R4 102 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 RCC2Q9P258 522 aaKnown RBP14.59□□□□□ -0.07
COL9A3-214ENST00000490398 TCF19Q9Y242 345 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 MINOS1-NBL1R4GNA1 71 aa14.59□□□□□ -0.07
COL9A3-214ENST00000490398 A0A087X0M5 115 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 A0A1B0GX30 115 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 NPIPB11E5RHQ5 1161 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 IL1AP01583 271 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 UCHL1P09936 223 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 MAPK3P27361 379 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-214ENST00000490398 HTR1DP28221 377 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 HSPA13P48723 471 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 GPR50Q13585 617 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 MPV17LQ2QL34 196 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 RBM48Q5RL73 367 aaKnown RBP14.58□□□□□ -0.08
COL9A3-214ENST00000490398 SIGIRRQ6IA17 410 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 OR52W1Q6IF63 320 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 C5orf24Q7Z6I8 188 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 FAM46BQ96A09 425 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 SELENOIQ9C0D9 397 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 LINC00574Q9H8X3 128 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 IDI2-AS1Q9NZ38 188 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 RAB26Q9ULW5 256 aa14.58□□□□□ -0.08
COL9A3-214ENST00000490398 LY6LH3BQJ8 138 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 CRTAPO75718 401 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-214ENST00000490398 MT-ND4P03905 459 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 MGMTP16455 207 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 KCNJ3P48549 501 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 HABP2Q14520 560 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-214ENST00000490398 HLA-DRB5Q30154 266 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 HSD17B12Q53GQ0 312 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 Q6ZS46 218 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 LINC00596Q86U02 117 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 RTN4RL2Q86UN3 420 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 NKAIN3Q8N8D7 197 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 ZNF565Q8N9K5 539 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 Q96M66 194 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 UQCC2Q9BRT2 126 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 TCF7L1Q9HCS4 588 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 ABCB10Q9NRK6 738 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 DPM3Q9P2X0 92 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 MEGF8Q7Z7M0 2845 aa14.57□□□□□ -0.08
COL9A3-214ENST00000490398 A0A1W2PPE3 182 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 TMEM30CPA0ZSE6 113 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 FAM90A22PA8MWA6 464 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 C15orf65H3BRN8 121 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 BUB1B-PAK6H3BSN5 160 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 CD37P11049 281 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 CPEP16870 476 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 SRMP19623 302 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 GABRA5P31644 462 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 DYNLT3P51808 116 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 MLLT11Q13015 90 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-214ENST00000490398 DIAPH2-AS1Q14236 149 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 GPR176Q14439 515 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 RBM39Q14498 530 aaKnown RBP14.56□□□□□ -0.08
COL9A3-214ENST00000490398 PRR31Q5SQ13 230 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 C1orf100Q5SVJ3 147 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 RAB12Q6IQ22 244 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 ZNF497Q6ZNH5 498 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 PHYHIPQ92561 330 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 THRSPQ92748 146 aa14.56□□□□□ -0.08
COL9A3-214ENST00000490398 MGLLQ99685 303 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms