RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 WNT5AP41221 380 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 ECI1P42126 302 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 NKX2-1P43699 371 aaPredicted RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 FAM53AQ6NSI3 398 aaPredicted RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 IL34Q6ZMJ4 242 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 AIFM2Q9BRQ8 373 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 SUCNR1Q9BXA5 334 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 RBM7Q9Y580 266 aaKnown RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 SLC22A20A6NK97 555 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 H7C1Q1 480 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 SIRPB1O00241 398 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 HFEQ30201 348 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 TMEM211Q6ICI0 200 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
BRD9-208ENST00000489816 CLCC1Q96S66 551 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 SEC11CQ9BY50 192 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 SPACA1Q9HBV2 294 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 FAM212BQ9NTI7 297 aaPredicted RBP13.43□□□□□ -0.26
BRD9-208ENST00000489816 ERRFI1Q9UJM3 462 aaPredicted RBP13.43□□□□□ -0.26
BRD9-208ENST00000489816 ADGRG4Q8IZF6 3080 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 PROB1E7EW31 1015 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 SPP1P10451 314 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 CLN3Q13286 438 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 SUMF2Q8NBJ7 301 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 APOBEC3DQ96AK3 386 aaPredicted RBP13.43□□□□□ -0.26
BRD9-208ENST00000489816 RARRES2Q99969 163 aa13.43□□□□□ -0.26
BRD9-208ENST00000489816 TMEM50AO95807 157 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CBR1P16152 277 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CEBPDP49716 269 aaPredicted RBP13.42□□□□□ -0.26
BRD9-208ENST00000489816 IDH3GP51553 393 aaPredicted RBP13.42□□□□□ -0.26
BRD9-208ENST00000489816 EWSR1Q01844 656 aaKnown RBP eCLIP13.42□□□□□ -0.268e-8■■■□□ 18.2
BRD9-208ENST00000489816 EIF3IQ13347 325 aaKnown RBP13.42□□□□□ -0.26
BRD9-208ENST00000489816 PEA15Q15121 130 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CEACAM21Q3KPI0 293 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 COLCA1Q6ZS62 124 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CCDC54Q8NEL0 328 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 C14orf79Q96F83 325 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 POM121L2Q96KW2 1035 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 PLEKHA2Q9HB19 425 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 Q9N2K0 584 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 OR1A1Q9P1Q5 309 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 IGSF23A1L1A6 192 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 MT-CO3P00414 261 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CCL20P78556 96 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CCDC71LQ8N9Z2 235 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 RNASE11Q8TAA1 199 aaKnown RBP13.42□□□□□ -0.26
BRD9-208ENST00000489816 SPSB4Q96A44 273 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 PPP1R3CQ9UQK1 317 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 BORCS7-ASMTA0A0B4J1R7 106 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 LYZL6O75951 148 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CNOT4O95628 575 aaKnown RBP13.42□□□□□ -0.26
BRD9-208ENST00000489816 ARG1P05089 322 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 FGF12P61328 243 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 TLE1Q04724 770 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 OR2C3Q8N628 320 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 UBAC2Q8NBM4 344 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 TMEM171Q8WVE6 324 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 RSRP1Q9BUV0 290 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 TMEM222Q9H0R3 208 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 FZR1Q9UM11 496 aa13.42□□□□□ -0.26
BRD9-208ENST00000489816 CARHSP1Q9Y2V2 147 aaKnown RBP13.42□□□□□ -0.26
BRD9-208ENST00000489816 A0A0G2JRQ6 117 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 WRBO00258 174 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 APLNRP35414 380 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 GUK1Q16774 197 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 MDP1Q86V88 176 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 OR5C1Q8NGR4 320 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 SPRY4Q9C004 299 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 POLEQ07864 2286 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 CDX4O14627 284 aaPredicted RBP13.41□□□□□ -0.26
BRD9-208ENST00000489816 GPR137BO60478 399 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 SLC34A2O95436 690 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 IL18BPO95998 194 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 GRPP07492 148 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 CD59P13987 128 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 SLC10A1Q14973 349 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 HES3Q5TGS1 186 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 OR14J1Q9UGF5 321 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 ZNF391Q9UJN7 358 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 ZNF175Q9Y473 711 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 OTOGLQ3ZCN5 2332 aa13.41□□□□□ -0.26
BRD9-208ENST00000489816 ANKRD30BLA7E2S9 258 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 HSPA12AO43301 675 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 FBP1P09467 338 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 VAMP2P63027 116 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 ZNF154Q13106 437 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 OR2G3Q8NGZ4 309 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 LILRB1Q8NHL6 650 aaPredicted RBP13.4□□□□□ -0.26
BRD9-208ENST00000489816 C19orf12Q9NSK7 152 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 ABI3Q9P2A4 366 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 INTS1Q8N201 2190 aaKnown RBP13.4□□□□□ -0.26
BRD9-208ENST00000489816 ZNF724A8MTY0 619 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 CHST1O43916 411 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 CD5P06127 495 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 SP1P08047 785 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 ARG2P78540 354 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 OR2B11Q5JQS5 317 aa13.4□□□□□ -0.26
BRD9-208ENST00000489816 SELENOHQ8IZQ5 122 aaKnown RBP13.4□□□□□ -0.26
BRD9-208ENST00000489816 OR2J1Q9GZK6 312 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms