RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 CDX1P47902 265 aaPredicted RBP13.3□□□□□ -0.28
TOP3B-217ENST00000489581 REG1BP48304 166 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 GPR50Q13585 617 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 EBI3Q14213 229 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 EAF1Q96JC9 268 aaPredicted RBP13.3□□□□□ -0.28
TOP3B-217ENST00000489581 CIB1Q99828 191 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 BARHL1Q9BZE3 327 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 ABCG5Q9H222 651 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 ZCCHC4Q9H5U6 513 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 LINC00574Q9H8X3 128 aa13.3□□□□□ -0.28
TOP3B-217ENST00000489581 DYNC2H1Q8NCM8 4307 aaKnown RBP13.29□□□□□ -0.28
TOP3B-217ENST00000489581 IGHV1-3A0A0C4DH29 117 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 NPIPB11E5RHQ5 1161 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 HCKP08631 526 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 DBTP11182 482 aaKnown RBP13.29□□□□□ -0.28
TOP3B-217ENST00000489581 SSTR5P35346 364 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 ZP1P60852 638 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 KISS1Q15726 138 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 ZNF260Q3ZCT1 412 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 CASC10Q5T4H9 136 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 RSBN1Q5VWQ0 802 aaPredicted RBP13.29□□□□□ -0.28
TOP3B-217ENST00000489581 FDX2Q6P4F2 183 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 TGIF2LXQ8IUE1 241 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 ZDHHC13Q8IUH4 622 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 Q8N9W7 124 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 OR8J1Q8NGP2 316 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 MUC7Q8TAX7 377 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 CNIH3Q8TBE1 160 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 PLPPR1Q8TBJ4 325 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 NCOR1P1Q9H4R4 102 aa13.29□□□□□ -0.28
TOP3B-217ENST00000489581 CCRL2O00421 344 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 GAPDHP04406 335 aaKnown RBP13.28□□□□□ -0.28
TOP3B-217ENST00000489581 ELANEP08246 267 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 MTNR1BP49286 362 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 ZNF816Q0VGE8 651 aaPredicted RBP13.28□□□□□ -0.28
TOP3B-217ENST00000489581 TMED1Q13445 227 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 FOXE3Q13461 319 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 ATP6AP1Q15904 470 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 ZSCAN26Q16670 478 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 KCTD20Q7Z5Y7 419 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 AMIGO2Q86SJ2 522 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 RFKQ969G6 155 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 GON7Q9BXV9 100 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 RIBC2Q9H4K1 309 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 LIN7CQ9NUP9 197 aaKnown RBP13.28□□□□□ -0.28
TOP3B-217ENST00000489581 ENOPH1Q9UHY7 261 aa13.28□□□□□ -0.28
TOP3B-217ENST00000489581 ZNF256Q9Y2P7 627 aaPredicted RBP13.28□□□□□ -0.28
TOP3B-217ENST00000489581 DAPL1A0PJW8 107 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 OR4C45A6NMZ5 311 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 J3QLW9 94 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 MPZL2O60487 215 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 LY86O95711 162 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 ZNF19P17023 458 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 CHATP28329 748 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 CCR9P51686 369 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 DNAL1Q4LDG9 190 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 ZNF691Q5VV52 312 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 LPCAT4Q643R3 524 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 SLC16A12Q6ZSM3 486 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 Q8N6K4 173 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 RNF152Q8N8N0 203 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 OR2T10Q8NGZ9 312 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 RBMXL1Q96E39 390 aaKnown RBP13.27□□□□□ -0.29
TOP3B-217ENST00000489581 GABARAPL1Q9H0R8 117 aa13.27□□□□□ -0.29
TOP3B-217ENST00000489581 SLC16A6O15403 523 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 SULT1B1O43704 296 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 ALKBH1Q13686 389 aaKnown RBP13.26□□□□□ -0.29
TOP3B-217ENST00000489581 PIGYQ3MUY2 71 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 ELP2Q6IA86 826 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 IZUMO1Q8IYV9 350 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 OR11H1Q8NG94 326 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 OR10A7Q8NGE5 316 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 OR5D14Q8NGL3 314 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 OR10K1Q8NGX5 313 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 PELI1Q96FA3 418 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 PLSCR3Q9NRY6 295 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 FAM118AQ9NWS6 357 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 GAR1Q9NY12 217 aaKnown RBP13.26□□□□□ -0.29
TOP3B-217ENST00000489581 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 SMAD5-AS1Q9Y6J3 95 aa13.26□□□□□ -0.29
TOP3B-217ENST00000489581 RRP9O43818 475 aaKnown RBP13.25□□□□□ -0.29
TOP3B-217ENST00000489581 FASP25445 335 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 FAM53AQ6NSI3 398 aaPredicted RBP13.25□□□□□ -0.29
TOP3B-217ENST00000489581 SATL1Q86VE3 508 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 SERPINA12Q8IW75 414 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 Q8NFD4 153 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 UBALD1Q8TB05 177 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 C4orf3Q8WVX3 66 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 SLC7A6OSQ96CW6 309 aaPredicted RBP13.25□□□□□ -0.29
TOP3B-217ENST00000489581 RNFT2Q96EX2 444 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 C4orf36Q96KX1 117 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 S1PR3Q99500 378 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 RASL11BQ9BPW5 248 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 HSPB9Q9BQS6 159 aa13.25□□□□□ -0.29
TOP3B-217ENST00000489581 SIRT4Q9Y6E7 314 aaPredicted RBP13.25□□□□□ -0.29
TOP3B-217ENST00000489581 DNAH7Q8WXX0 4024 aa13.24□□□□□ -0.29
TOP3B-217ENST00000489581 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
TOP3B-217ENST00000489581 J3QRE1 110 aa13.24□□□□□ -0.29
TOP3B-217ENST00000489581 IGHG4P01861 327 aa13.24□□□□□ -0.29
TOP3B-217ENST00000489581 VDAC1P21796 283 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms