RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 KIF25Q9UIL4 384 aa17.41■□□□□ 0.38
SND1-214ENST00000489417 TRAPPC2LQ9UL33 140 aa17.41■□□□□ 0.38
SND1-214ENST00000489417 MGAT4AQ9UM21 535 aa17.41■□□□□ 0.38
SND1-214ENST00000489417 A0A1B0GW55 424 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 TRDCB7Z8K6 153 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 TNFRSF13BO14836 293 aaPredicted RBP17.4■□□□□ 0.38
SND1-214ENST00000489417 F12P00748 615 aaPredicted RBP17.4■□□□□ 0.38
SND1-214ENST00000489417 TCRBP04435 133 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4L2P0CJ85 424 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4L3P0CJ86 424 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4L4P0CJ87 422 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4L5P0CJ88 424 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4L6P0CJ89 424 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4L7P0CJ90 424 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 EFNA4P52798 201 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 HLA-DRB3P79483 266 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 EDDM3AQ14507 147 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4L9Q6RFH8 374 aaPredicted RBP17.4■□□□□ 0.38
SND1-214ENST00000489417 ARRDC1Q8N5I2 433 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 TMEM185AQ8NFB2 350 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 OR5D13Q8NGL4 314 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 MED30Q96HR3 178 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 CCL19Q99731 98 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 PRRT1Q99946 306 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 TMEM246Q9BRR3 403 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 NECAP2Q9NVZ3 263 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 SLC2A8Q9NY64 477 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 DUX4Q9UBX2 424 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 SCP2D1Q9UJQ7 156 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 NUBP2Q9Y5Y2 271 aa17.4■□□□□ 0.38
SND1-214ENST00000489417 MEIKINA0A087WXM9 373 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 SDCBPO00560 298 aaPredicted RBP17.39■□□□□ 0.38
SND1-214ENST00000489417 FABP7O15540 132 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 NDUFA2O43678 99 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 IGHV2-70P01814 119 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 GSTT2P0CG29 244 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 RCC1P18754 421 aaPredicted RBP17.39■□□□□ 0.38
SND1-214ENST00000489417 COL8A1P27658 744 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 GLIPR1P48060 266 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 BTN2A1Q7KYR7 527 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 OVCH2Q7RTZ1 564 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 SLC36A1Q7Z2H8 476 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 C14orf79Q96F83 325 aa17.39■□□□□ 0.38
SND1-214ENST00000489417 MBNL3Q9NUK0 354 aaKnown RBP17.39■□□□□ 0.38
SND1-214ENST00000489417 TRAV39A0A0B4J263 110 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 TMPRSS2O15393 492 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 ADAM20O43506 726 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 NDUFS7O75251 213 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 NDUFB6O95139 128 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 TSPAN5P62079 268 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 SCGB2B2Q4G0G5 96 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 IDO2Q6ZQW0 420 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 TMEM17Q86X19 198 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 CREB3L1Q96BA8 519 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 UPRTQ96BW1 309 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 CHODLQ9H9P2 273 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 SCTP09683 121 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 OR5H8P0DN80 308 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 P2RX3P56373 397 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 RBMS2Q15434 407 aaKnown RBP17.38■□□□□ 0.37
SND1-214ENST00000489417 AVPI1Q5T686 147 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 LYPD2Q6UXB3 125 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 TPRX1Q8N7U7 411 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 RAB1CQ92928 201 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 TIMD4Q96H15 378 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 GINS4Q9BRT9 223 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 MARVELD1Q9BSK0 173 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 NUDT15Q9NV35 164 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 KAAG1Q9UBP8 84 aa17.38■□□□□ 0.37
SND1-214ENST00000489417 TRAV6A0A075B6T7 132 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 ODAMA1E959 279 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 FUOMA2VDF0 154 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 PPIHO43447 177 aaKnown RBP17.37■□□□□ 0.37
SND1-214ENST00000489417 ERP29P30040 261 aaKnown RBP17.37■□□□□ 0.37
SND1-214ENST00000489417 HMGN3Q15651 99 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 C6orf183Q5T699 404 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 C5orf24Q7Z6I8 188 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 MUC20Q8N307 709 aaPredicted RBP17.37■□□□□ 0.37
SND1-214ENST00000489417 OR4A4PQ8NGN8 299 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 OR13C8Q8NGS7 320 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 C20orf85Q9H1P6 137 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 NCOR1P1Q9H4R4 102 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 KCNIP1Q9NZI2 227 aa17.37■□□□□ 0.37
SND1-214ENST00000489417 hCG_2014768A0A024R1R8 64 aa17.36■□□□□ 0.37
SND1-214ENST00000489417 INMT-MINDY4F8WBC2 141 aa17.36■□□□□ 0.37
SND1-214ENST00000489417 H2AFB2P0C5Z0 115 aa17.36■□□□□ 0.37
SND1-214ENST00000489417 EDDM3BP56851 147 aa17.36■□□□□ 0.37
SND1-214ENST00000489417 TMEM33P57088 247 aa17.36■□□□□ 0.37
SND1-214ENST00000489417 SEC61A1P61619 476 aaKnown RBP17.36■□□□□ 0.37
SND1-214ENST00000489417 IGSF11Q5DX21 431 aa17.36■□□□□ 0.37
SND1-214ENST00000489417 SLC25A21Q9BQT8 299 aaPredicted RBP17.36■□□□□ 0.37
SND1-214ENST00000489417 SLC25A10Q9UBX3 287 aaPredicted RBP17.36■□□□□ 0.37
SND1-214ENST00000489417 DSCAMO60469 2012 aa17.36■□□□□ 0.37
SND1-214ENST00000489417 NDUFB3O43676 98 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 CTXN2P0C2S0 81 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 GLP1RP43220 463 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 CARTPTQ16568 116 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 OR13A1Q8NGR1 328 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 TERB2Q8NHR7 220 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 MRGPRDQ8TDS7 321 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms