RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 DNAJB11Q9UBS4 358 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 SVILO95425 2214 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 SIRPB1O00241 398 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 GPR31O00270 319 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 GFRA3O60609 400 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 ZNF250P15622 560 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 RAB32Q13637 225 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 PLPPR1Q8TBJ4 325 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 MRPL24Q96A35 216 aaKnown RBP12.32□□□□□ -0.44
NINJ1-204ENST00000489274 GSKIPQ9P0R6 139 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 GLS2Q9UI32 602 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 FZR1Q9UM11 496 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 WIPI2Q9Y4P8 454 aa12.32□□□□□ -0.44
NINJ1-204ENST00000489274 APC2O95996 2303 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 M0R1B8 84 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 SPDEFO95238 335 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 HAND1O96004 215 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 CRYAAP02489 173 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 RCC1P18754 421 aaPredicted RBP12.31□□□□□ -0.44
NINJ1-204ENST00000489274 GLRXP35754 106 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 SRPXP78539 464 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 WDR82Q6UXN9 313 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 PRR7Q8TB68 274 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 ARPC5LQ9BPX5 153 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 USB1Q9BQ65 265 aaKnown RBP12.31□□□□□ -0.44
NINJ1-204ENST00000489274 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 SLC5A7Q9GZV3 580 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 MSL2Q9HCI7 577 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 ZNF835Q9Y2P0 537 aa12.31□□□□□ -0.44
NINJ1-204ENST00000489274 ESPL1Q14674 2120 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 PTBP3O95758 552 aaKnown RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 IGHV3-13P01766 116 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 RRASP10301 218 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 NUP62P37198 522 aaPredicted RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 NKX6-1P78426 367 aaPredicted RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 BEX5Q5H9J7 111 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 ZNF826PQ6ZT77 177 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 MRGPRGQ86SM5 289 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 OR10J5Q8NHC4 309 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 RRNAD1Q96FB5 475 aaKnown RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 PHYHIPLQ96FC7 376 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 AQP10Q96PS8 301 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 MBNL3Q9NUK0 354 aaKnown RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 MED9Q9NWA0 146 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 OR5AC2Q9NZP5 309 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 FBXO9Q9UK97 447 aaPredicted RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 ASPMQ8IZT6 3477 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 PRRC2CQ9Y520 2896 aaKnown RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 IGKV1D-13A0A0B4J2D9 117 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 IGHV3-64DA0A0J9YX35 117 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 PHF1O43189 567 aaPredicted RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 NMBP08949 121 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 IGKV1-13P0DP09 117 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 CD200P41217 278 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 MSMPQ1L6U9 139 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 ACP7Q6ZNF0 438 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 SECTM1Q8WVN6 248 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 PCNPQ8WW12 178 aaKnown RBP12.3□□□□□ -0.44
NINJ1-204ENST00000489274 TMEM222Q9H0R3 208 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 ELOVL5Q9NYP7 299 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 TAAR3PQ9P1P4 343 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 OR2W1Q9Y3N9 320 aa12.3□□□□□ -0.44
NINJ1-204ENST00000489274 A6NLC8 198 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 RLN2P04090 185 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 FAM27E3Q08E93 113 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 PRAMEF6Q5VXH4 476 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 GFRALQ6UXV0 394 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 ZNF818PQ6ZRF7 136 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 LYZL2Q7Z4W2 148 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 TBC1D26Q86UD7 250 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 OR1S1Q8NH92 325 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 KIRREL1Q96J84 757 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 TP53RKQ96S44 253 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 ZNF471Q9BX82 626 aaPredicted RBP12.29□□□□□ -0.44
NINJ1-204ENST00000489274 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 TMED3Q9Y3Q3 217 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
NINJ1-204ENST00000489274 A0A0G2JNJ9 132 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 F5H0A9 414 aaPredicted RBP12.28□□□□□ -0.44
NINJ1-204ENST00000489274 IFNL4K9M1U5 179 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 BMP5P22003 454 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 LUMP51884 338 aaPredicted RBP12.28□□□□□ -0.44
NINJ1-204ENST00000489274 COMMD7Q86VX2 200 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 CMTM1Q8IZ96 169 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 STOML3Q8TAV4 291 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 CCL28Q9NRJ3 127 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 ZFP57Q9NU63 452 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 Q9UFV3 132 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.28□□□□□ -0.44
NINJ1-204ENST00000489274 WNT9BO14905 357 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 KCNAB3O43448 404 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 DEDDO75618 318 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 CFHR2P36980 270 aa12.28□□□□□ -0.44
NINJ1-204ENST00000489274 S100A10P60903 97 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms